Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4667 |
Symbol | |
ID | 6180843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 1783567 |
End bp | 1784868 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641684426 |
Product | major facilitator transporter |
Protein accession | YP_001811337 |
Protein GI | 172063686 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.207376 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTACC TTTCTCATCT TTCCTCGTCG TCGCGACGTG CCGCGTCGCA ACCTTCATCT CATCGGCGAT CCCTGATCGC GTCCAGTCTC GGCAATTTGC TCGAATGGTT CGACTGGACG GTCTATACGG TTGCATCGGT CTATATTGCC GGCGCGCTGT TCGACAATAC GAACAAGACA TCGTCGCTGC TCGGTACGCT GGCCGTATTC GCTGCAGGCT TCTTCGCCCG CCCGTTGGGT GGCATAGTAT TCGGCGCGAT CGCCAACCGC ATCGGACGCC GCTCGGTACT CCTGAGTACG ATGCTCCTCA TGGCGTTTGC GAGCCTTCTG ATCGCGATCA TCCCGCCATA TGACGCAATC GGCAGCTGGG CCTCGGCCGC ATTGCTGGTG GCGCGCCTCG TGCAGGGTGC GGCGCACGGC GGCGAAACAA CGGCGTCCTA TGCCTACGTT GCCGAAATCG CTCCGCCCGC GCAGCGTGGT TTGTGGTCGA GTGCCGTGTT CATGTCGGTC GGCGCCGGCT CGCTGATTGC CACTTTTTTT CTTGCGTCGC TCACGGCGTT CCTTTCACCG GACGCCATGC AGAACTGGGG ATGGCGGGTG CCGTTCGCGT CGGGCGGGTT TCTCGCGATA TTCGCGCTAT GGCTGCGCCG CAATATGGTG GAAAGCGTCA TCGTTGACGC CTCGACCCAG GCTCGTCACA AGCCGTGGCC GCGGGCCAAG GTCGTGCGCG AAGGCTTGAA GCTGTTCGTG TACGAGGCCG GTTCGACGCT TACCTACTAT ACGTGGGTAA CGTCCGCAGC CATCTACGCA ATCAGTGTCA AGCACATGGA TGCGCACCGC GCGTTCACAA TGAGTTGCAT TGCCCAGGTA ATCTATCTGA TCGCGCTTCC GCTCATTGGT CGCCTTTCCG ATTTCACCGG ACGCAAGGTT ACGACGCTCA TCTCGCTGCT CGGCATCTCG ATCACCATCT TTCCGCTCTG GAGCCTGATT TCCAGCGAGC CGTGGACGTT GCTCGTCACG CAGTCGGTCG GGCTCGTGCT CGTTGCATTT ATCACCGGGA GCAAGCCTGC GGCCATTTCG GAACAAGTGC CGACACGCTA CCGCACCCGT CTCTTCGGCT TTTTCATTTC ACTGGCGGTC GCATTCTTCG GCGGCACCGC CTCATATCTG AATGCATGGC TGTATTCCTT CGACAAGGGG CAGCTATTCA ATGTCTATCT CATCGTGGTG GCGGTAGTCG CGAGTTGCGC CGTGCTGACA TGGAAGAACA ACACCGGAGT AAAGCTGGAC GATATTGAAT GA
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Protein sequence | MTYLSHLSSS SRRAASQPSS HRRSLIASSL GNLLEWFDWT VYTVASVYIA GALFDNTNKT SSLLGTLAVF AAGFFARPLG GIVFGAIANR IGRRSVLLST MLLMAFASLL IAIIPPYDAI GSWASAALLV ARLVQGAAHG GETTASYAYV AEIAPPAQRG LWSSAVFMSV GAGSLIATFF LASLTAFLSP DAMQNWGWRV PFASGGFLAI FALWLRRNMV ESVIVDASTQ ARHKPWPRAK VVREGLKLFV YEAGSTLTYY TWVTSAAIYA ISVKHMDAHR AFTMSCIAQV IYLIALPLIG RLSDFTGRKV TTLISLLGIS ITIFPLWSLI SSEPWTLLVT QSVGLVLVAF ITGSKPAAIS EQVPTRYRTR LFGFFISLAV AFFGGTASYL NAWLYSFDKG QLFNVYLIVV AVVASCAVLT WKNNTGVKLD DIE
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