Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4518 |
Symbol | |
ID | 6179919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 1622752 |
End bp | 1623600 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641684279 |
Product | MerR family transcriptional regulator |
Protein accession | YP_001811190 |
Protein GI | 172063539 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.584937 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.575813 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAAAAC AGACTCCCAC CATGCCGGAC GAGGCCGCCG CGAATTCCCG CAACGAGTAC ACGGTCGACG AGCTCGCGCG CGTGTCCGAC ACGACCGTGC GCAACGTTCG TGCGTACCAG GATCGCGGGC TGCTCGCGCC CCCCGAGAAG CGCGGGCGCG TCGGCATCTA CGACGACACG CACGTCGCCC GCCTGAAGCT GATCAACCAT CTGCTCGCAC GCGGCTACAC GCTGGCGAAC ATCCAGGACC TGATCAAGGC GATCGACGAA GGTCACGACC TGCGCTCGAT CCTCGGCCTG GAAAACGCAA TCGGCGGCCG CTGGTCGCAC GAACTGCCGA AAACCTATTC GCTCGCCACC CTCGCACAGA TGTTCGGCCC GCAGACGGCA TCGCAACTGT CGCGCGTGAC CGAACTCGGG TTGCTCGAAC GGCACGGCCT GTCGTTCGTC GCGAAAAGCC CCGCGCTGCT CGAGGCCGCG GCCGCGATGG CGAAGGAAGG CATCCCGCCG CGCGAACTGC TCGACGTGAT CAGCCTCGCG CGGCCGCACT TCGACGCGAT CGCGCGGCTG CTCGTCGATC TCGTCGTGAA GCGGCTCGAC CGCTACGACG AAGGCACGCT GCCGCCGGTG ACCGACGTGC CCGCGCTCGT CGATGCGATC TGGCGCCTGC GCCCGCTCGC GGCCGTGTTC GTCGAAGGCG AGACGAACCG CGCGCTCGAG AACGCGGCAA GCGCCTATCT CGGCGGGCGC GTCGCGACGA TCCTCGACAA GAAACTCAGC GACGAGGCGG CGCGGCAATC CGGCGCGACC GATACGTCCG ATCCGCCAGG CGACGGCGGC AAAGCATAG
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Protein sequence | MSKQTPTMPD EAAANSRNEY TVDELARVSD TTVRNVRAYQ DRGLLAPPEK RGRVGIYDDT HVARLKLINH LLARGYTLAN IQDLIKAIDE GHDLRSILGL ENAIGGRWSH ELPKTYSLAT LAQMFGPQTA SQLSRVTELG LLERHGLSFV AKSPALLEAA AAMAKEGIPP RELLDVISLA RPHFDAIARL LVDLVVKRLD RYDEGTLPPV TDVPALVDAI WRLRPLAAVF VEGETNRALE NAASAYLGGR VATILDKKLS DEAARQSGAT DTSDPPGDGG KA
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