Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4322 |
Symbol | |
ID | 6180643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 1396785 |
End bp | 1398110 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641684089 |
Product | flavin-dependent oxidoreductase |
Protein accession | YP_001811000 |
Protein GI | 172063349 |
COG category | [C] Energy production and conversion |
COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCAAG GCGCAGGCAG CCACATGAAC GCATGGCGGC ACCCGAGCAA CCCGCCGGAC GCGAGCATCA ACCTCGACTT CGCGATCGGC ATCGCGCGCA AGGCGGAAGC CGCCGGCCTC GCGTTCGCGT TCGTCGCGGA CGGCCTCTAC ATCAATGAGA AGTCGATCCC GCACTTCCTG AACCGCTTCG AGCCGCTGAC CGTGCTGTCG GCGCTCGCGG TCGCGACGCG CAAGATCGGG CTCGCGGGCA CGATCTCGAC GTCGTACAGC GAGCCGTTTA CGGTCGCGCG CCAGCTCGCG TCGCTCGACG CGATCAGCGG CGGGCGCGCG GGCTGGAACG TCGTGACGAC ACCGCTCGAA GGCACCGCGA AGAATTTCGG CAAGGCGCAT CCCGAGCACG CGTTACGCTA CGAGATCGCC GATGAATACC TCGAGGTCGT GCAGGGGCTG TGGGACAGCT GGGACGACGA CGCGTTCGTG CGCGACCGCG CGACCGGGCG CTTCTTCGAT CGCGACAAGC TCCATACGCT CGACCATCAC GGCCGCTTCT TCCAGGTCGC GGGCCCGCTG AACATCCAGC GCTCGCCGCA GGGCCAGCCG GTGATCTTCC AGGCCGGCTC ATCCGACACA GGCATCGGGC TCGCGGGCAA ATACGCGGAT GCCGTGTTCA CGCATTCGCC GTCGCTCGAC GAAACGGCCG CGTTCACGCG GCGCGTGAAG CAGAGCGCGA TCGAGCACGG ACGGCAAGCC GGCGACGTGA AAATCTTCCC CGGCGTCGGC CCGATCGTCG GCCGCACGGC CGCCGAAGCC GAAGACAAAT ACCAGGCGAT CCGCGACCTG CTGACGATCG ACGAGGCGCT CGCGTATCTC GGCCGCTATT TCGATCACCA CGATTTCACG CAGTACGCGC TCGACGCACC GTTCCCCGAA CTCGGCGACC TCGGCCGCAA CAGCTTTCGC TCGACCACCG ACCGGATCAA GGCCGACGCG AAGCGCAAGC AGCTCACGCT GCGCGAGACG GCGCTCGCCG TCGCGACGCC GCGCCCGAAC TTCATCGGCA CGGCCGAGCA TGTCGCCGAC GAGCTGATCC GCTGGCACGA CGCCGGCGCC GGCGACGGCT TCATCCTCGG CTTCGCGGTG CAGGCGCAGG GCGTCGACGA TTTCGTCGAC CTCGTGATTC CGGTGCTCGA GGCACGCGGC CGCTACAGCC GCGACCTGCC GGGAAGCACG CTGCGCGACC ACCTCGGCCT GCCGCGCAAG GCGAGCCGCC ATGCGGCGCC CGGCGCGGTG CACAAACAGG ACGACGCGGC CGAAGCGCAC GCGTGA
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Protein sequence | MLQGAGSHMN AWRHPSNPPD ASINLDFAIG IARKAEAAGL AFAFVADGLY INEKSIPHFL NRFEPLTVLS ALAVATRKIG LAGTISTSYS EPFTVARQLA SLDAISGGRA GWNVVTTPLE GTAKNFGKAH PEHALRYEIA DEYLEVVQGL WDSWDDDAFV RDRATGRFFD RDKLHTLDHH GRFFQVAGPL NIQRSPQGQP VIFQAGSSDT GIGLAGKYAD AVFTHSPSLD ETAAFTRRVK QSAIEHGRQA GDVKIFPGVG PIVGRTAAEA EDKYQAIRDL LTIDEALAYL GRYFDHHDFT QYALDAPFPE LGDLGRNSFR STTDRIKADA KRKQLTLRET ALAVATPRPN FIGTAEHVAD ELIRWHDAGA GDGFILGFAV QAQGVDDFVD LVIPVLEARG RYSRDLPGST LRDHLGLPRK ASRHAAPGAV HKQDDAAEAH A
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