| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4271 |
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| Symbol | |
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| ID | 6180334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1328467 |
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| End bp | 1328880 |
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| Gene Length | 414 bp |
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| Protein Length | 137 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641684040 |
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| Product | PilT domain-containing protein |
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| Protein accession | YP_001810951 |
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| Protein GI | 172063300 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5573] Predicted nucleic-acid-binding protein, contains PIN domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0321554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0832297 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGGGA TTGAGCCGGC GAAATCGTTC GTCGACAGCA ATGTCGTGCT TTATCTGCTG
TCCGAGGACG AGACCAAGGC GAATCGTGCG GAGGCGCTGT TCCTTCGGCG GCCGACCATC
AGCGTTCAGG TACTCAACGA AGTTGCCAGC GTTTGCAGCC GCAAATTGCG CATGCCGTGG
AGCGACATAG GGCAGTTTCT GGAGCCGATC AGGAGTTTGT GCCAGGTCGT CCCGATCACG
GTGGACACGC ATGACCTGGC GCGAAGGCTG GCGGAGCGGC ACGGTTTCTC TTTCTACGAC
GCATGCATCG TGGCAACCGC TTCGATCGAG GGCTGCGAAT ACCTGTACAC GGAGGACATG
CACGACGGCT TGCGCGTGGA GGGTGGTCCG GTGTTGCGAA ATCCGTTTGC CTGA
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| Protein sequence | MSGIEPAKSF VDSNVVLYLL SEDETKANRA EALFLRRPTI SVQVLNEVAS VCSRKLRMPW
SDIGQFLEPI RSLCQVVPIT VDTHDLARRL AERHGFSFYD ACIVATASIE GCEYLYTEDM
HDGLRVEGGP VLRNPFA
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