| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4120 |
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| Symbol | |
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| ID | 6179173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1157341 |
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| End bp | 1159119 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641683890 |
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| Product | gluconate 2-dehydrogenase (acceptor) |
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| Protein accession | YP_001810801 |
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| Protein GI | 172063150 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCGG AAAAGAAGCC GCACGTCGAT GCGGTGATTG TCGGCTTCGG CTGGACCGGC
GCGATTCTCG CGAAGGAACT GACCGAAGCG GGCCTGAACG TCGTCGCGCT CGAGCGCGGC
GAGTATCGCG ACACCTATCC GGACGGCGCG TATCCGAACA CGATCGACGA GCTGACCTAC
AACGTTCGCA AGAAGCTGTT CCTCGATCTG TCGAAGACGA CCGTCTCGAT CCGCCACGGC
GTGCAGGACA CCGCACTGCC GTACCGGCAG CTCGCCGCGT TCCTGCCGGG CGAGGGCGTC
GGCGGCGCGG GGCTGCACTG GTCGGGCGTG CACTTCCGGA TCACGCCGGA GGAGCTGCGC
CTGCGCAGTC ACTACGAAGA GCGCTACGGC AAGAAGTTCA TCCCGGAAGG CATGACGATC
CAGGACACGG GCGTCAGCTA CGACGAGCTC GAGCCGTATT TCGACTTCGC GGAGAAGGTG
TTCGGCACGT CGGGGCAGGC GTACAAGGTC GGCGGCAAGG TGGTCGGCGA CGGCAACGTG
TTCGAGGCGA ACCGCAGCGA CAACTTCCCG CTGCCCGCGC AGCTCAACAC CTACTCGGCG
CAGCGCTTCT CCGACGCGGC GAAATCGCTC GGGCTGCATC CGTACCGGCT GCCGTCGGCG
AACACGTCGG GGCCGTACAC GAACCCGTAC GGCGTGCAGA TGGGGCCGTG CAACTTCTGC
GGCTACTGCA GCGGCTACGC GTGCTACATG TACTCGAAGG CGTCGCCGAA CCTGAACATC
CTGCCCGCGC TCAAGCAGGC GCCGAACTTC GAATTGCGCT CGAAGTGCCA CGTGCTGCGC
GTGGACCTGG ACGACACGAA GAAGCGCGCG ACGGGCGTCA CCTACGTCGA CCCGGCCGGC
CGTGAAGTGC ATCAGCCGGC CGATCTCGTG ATCGTCGCCG CGTTCCAGTA TCACAACGTG
CACCTGCTGC TGCTGTCGGG CATCGGAAAG CCGTACGACC CGATCTCGGG CGAAGGCGTC
GTTGGCCGCA ATTTCGCGTA CCAGAACCTG TCGACCATCA AGGCGTTCTT CGACAAGGAC
ACCTACACGA ACCCGTTCAT CGGCGCGGGC GGCAACGGCG TCGCGGTGGA CGACTTCAAC
GCGGACAACT TCGACCACGG CCCGCTCGGC TTCGTCGGCG GCTCGCCGCT GTGGGTGAAC
CAGGCGGGCG TGAAGCCGAT CAGCGGCATC GCGACGCCGC CCGGCACGCC GCAGTGGGGC
TCGGCGTGGA AGAAGGCGGT CAAGGACAAC TACGCGCACA CGATCTCGAT GGACGCGCAC
GGCACGAACA TGTCGTACCG CGACGTGTAC CTCGACCTCG ATCCGACCTA CCGCGATTCG
TACGGCCAGC CGCTGTTGCG GATGACCTTC GACTGGAAGG ACAACGACAT CCGGATGGCG
CAGTACGTGA CCGGGCAGAT GAAGAAGATC GCGGAGGCGA TGGGGCCGAA GGCGATCGGC
GTGTCGACGC GCGAGTTCGG CAAGCATTTC GATTCGCGCG CGTACCAGAC GACTCACCTG
GTCGGCGGCG CGATCATGGG CACCGATCCG AAGACGAGCG TGCTGAACCG CTACCTGCAA
TGCTGGGACG TGCACAACGT GTTCGTGATG GGCGCGTCGG CGCTGCCGCA GGGCATCGGC
TACAACCCGA CCGGGATCAT CGCCGCGCTG GCCTACTGGT CGGCACGCGC GATCCGCGAG
CAATACCTGA AAAATCCCGC CCCGCTGGTG ACCGCATGA
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| Protein sequence | MAAEKKPHVD AVIVGFGWTG AILAKELTEA GLNVVALERG EYRDTYPDGA YPNTIDELTY
NVRKKLFLDL SKTTVSIRHG VQDTALPYRQ LAAFLPGEGV GGAGLHWSGV HFRITPEELR
LRSHYEERYG KKFIPEGMTI QDTGVSYDEL EPYFDFAEKV FGTSGQAYKV GGKVVGDGNV
FEANRSDNFP LPAQLNTYSA QRFSDAAKSL GLHPYRLPSA NTSGPYTNPY GVQMGPCNFC
GYCSGYACYM YSKASPNLNI LPALKQAPNF ELRSKCHVLR VDLDDTKKRA TGVTYVDPAG
REVHQPADLV IVAAFQYHNV HLLLLSGIGK PYDPISGEGV VGRNFAYQNL STIKAFFDKD
TYTNPFIGAG GNGVAVDDFN ADNFDHGPLG FVGGSPLWVN QAGVKPISGI ATPPGTPQWG
SAWKKAVKDN YAHTISMDAH GTNMSYRDVY LDLDPTYRDS YGQPLLRMTF DWKDNDIRMA
QYVTGQMKKI AEAMGPKAIG VSTREFGKHF DSRAYQTTHL VGGAIMGTDP KTSVLNRYLQ
CWDVHNVFVM GASALPQGIG YNPTGIIAAL AYWSARAIRE QYLKNPAPLV TA
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