| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3797 |
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| Symbol | |
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| ID | 6180422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 783344 |
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| End bp | 785959 |
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| Gene Length | 2616 bp |
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| Protein Length | 871 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641683568 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001810480 |
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| Protein GI | 172062829 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.198076 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.260408 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCATG CCCGATGCGG TATGCCCGAA TCGAATATTC ATCGACGGAA CTATTCGGCG
GCGCTCGCGA TCATGTTAAC TTCCGTCCAT CGTCCAGACC GGCGGGCCAC GCTTCGACGC
GCGCCCGCAC GCCTACTCAT GCGACATTTC CTGCTCGGCT GGCTGCTCGC GGCCGTCGTC
TCGGCCGCCC ACGCGGCCGC TCCCGCCCAT GCCGCCGCAT CGGCTGCCTC CGGCGCCGTG
CCCGCGCTGA CGCCGCAACA GGCGCAGCAA GCGCTCTCCG TCCTGCAAAA CCCGCGCGAG
CGCGAACAGG TCGAAACCAC GTTGCGCGCG ATCGCGGCCG TCGGCGTGCT GAGCACGCCC
GCGCTGCCGA CGAGCGGCGC CGCGCCGGCC AGCGCGGCAT CGGCTGCCGC CGCGCCCGCC
GCGCTCACGA CGAACGGGCT CGCATCGCTG GTCGTCCGGC AGGGTTCGCG CTGGGCCGCC
CAGATCGGCG GCGCGCTGCG CGAATCGCTG AGCTCGCTGC TCGATGTGGG CTCGGTGGGC
AACTGGTGGC ACGAGCGGCT GGTCCGCGCC GATGCACGTG CGGACCTCAC GCGCGCGCTC
GGGATCATCC TCGCCGTGCT CGTGCCGGCG TTCGTCATCG AATGGTTCGC GAGGCGGCTG
CTGCGGCGCG CGCTGGCGGC GCTGAGCGCG CGTCGCGCCG AATCGTCGCG CGTGGCCGAA
GACGAGCCCG CCGAGCCAGC CGAACCCGCC GGGTCCGAGC CGCCCGGCCC GGACGACCAC
GCGCCGCCAG CCTCGACGGT CGACGCCGCC GCCCGGGCGG ACGGCACCGG CAGGCCCGAT
ACGTTGTCGC AAGGCCGCGG TCATGCGCGG CGCAACACCA CGCTGCTGCG CCGGATGCCG
CGCGCGCTGA TCAGCCTCGC GCTGCGGGTC GTGCCGCTGC TGGTGTTCGT CGGCGTCGCG
AGCCTGACGA TGTCGTTGCT GGACGACGCC GGCACGCCCA CCGAAATCGC ACTCGAATCG
CTGATCGACA TCTACGTGAT CTGCCGCCTC GTGACGATCG TCAGCCGGCT GTTCTTCCAG
CCCGATGCGC CGCAGCTGCG GTTGCTGCAC ATCAGCGATG CCTGGGCCGC GTTCGCGCAG
CGCTCGATCG CGCGGATCGC GATCGTCCTC GGCGCCTGCA CCGCCGCGGT CGAGCTCGCC
GGCAGCTTCG GCCTCAGCGA CGCCGGCCAC GTCGCGCTGC TTAAAGCCGT CGCGCTCGTC
GGCCACCTGA TGATCTCGGC GCTGATCCTG CGGTGCCGCC AGCCGGTCGC CGCGCGCATT
CGCGCGGCCG GCGACGAGCG GCCGGCCTTC GCGGTGATCG GCAACGCGCT CGCCGACGCG
TGGGCGCCCG TGGCGGTGTT CGTCGTGATG GCGTTGTGGT TCGTGTGGGC GCTCGACGTC
CACAACGGCT ACCGCGTGCT GATCACGCTC GGCGGCCGCT CGATCGCCGT GATGGTCGGC
ATGCGGATCG TGTCGATCGT CGTGTTCGGC GCGCTCGCGC GGCTGTTCCA GCGCCGCGAC
GACGATCGCA CGCTCGTCCA CCTGCACGCG TACCGCTACT ACCCGCTGAT GCGCCAGATC
GTGTCTGCGG TGATCGCCGT CGTGACCGTC GTGCTGCTGC TGCAGACCTG GGGCGTGCCG
ATCTTCCATG CGTTCGAGAC CGGCACGATC GGCCATCGGC TCGCGTCGGC GCTGATCACG
ATCGCGATCG CGGCCGTCGT CGCGCTGCTC GTATGGGAAG CCGCGAACAT CGCGATCGAG
CGGCGCCTGC AGCTATGGAC GCGCGAAGGC AACCTCGTGC GCGCGGCGCG ATTGCGCACG
CTGCTGCCGA TGCTGCGTTC GCTGCTGTTC ATCCTGATCG CGCTCGTCGT CGTGCTGACG
GGCCTCAGCG AAATCGGCGT GAACATCGGC CCGCTGCTCG CCGGCGCCAG CATCTTCGGC
GTCGCGCTCG GCTTCGGCTC GCAGAAGCTC GTGCAGGATT TCATCACCGG GATCTTCCTG
CTGATGGAGA ACGCGATGCA GGTGGGCGAC TGGGTCACGC TCGCCGGCGT GTCGGGCACG
GTCGAATACC TGTCGATCCG CACCGTGCGG CTGCGCGCGG GCGACGGGTC GCTGTACACG
ATCCCGTTCA GCTCGGTGAC GACCGTCAAC AATACGAACC GCGGGCTCGG CAACGCGGCC
GTCAAGGTCA GCATCGCCTA CGGCCAGGAC ATCGATCTCG CGATCGCGAC GCTGAAAGAG
ATCGGCGCCG CGCTGCGCGA CGACCCGAAC TACAAGGACG GCATCCTGTC GGATTTCAGC
TACTGGGGCA TCGATCAGGT CGACGGCGCA ATGATCGCGC TGGCAGGCCA GATCCAGTGC
AAGGACTCGG CACGCTGGGG CGTGCAGCGC GAGTTCAACC GGCGGATCGC GGTGATGTTC
CGCGAACGCG GGATCCGGAT CGCGAATCCG CAGCGCAGCC TCGTCGCGTA TGACGAAGGT
TCGCGACCCG TTGGCCCCGA ATACGACGGC GATGCCGCCG ACATGCCTGC CGCCGACACG
CGTCCCGCGC CGCCGCCGGA GCGCAAGCCG AACTGA
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| Protein sequence | MQHARCGMPE SNIHRRNYSA ALAIMLTSVH RPDRRATLRR APARLLMRHF LLGWLLAAVV
SAAHAAAPAH AAASAASGAV PALTPQQAQQ ALSVLQNPRE REQVETTLRA IAAVGVLSTP
ALPTSGAAPA SAASAAAAPA ALTTNGLASL VVRQGSRWAA QIGGALRESL SSLLDVGSVG
NWWHERLVRA DARADLTRAL GIILAVLVPA FVIEWFARRL LRRALAALSA RRAESSRVAE
DEPAEPAEPA GSEPPGPDDH APPASTVDAA ARADGTGRPD TLSQGRGHAR RNTTLLRRMP
RALISLALRV VPLLVFVGVA SLTMSLLDDA GTPTEIALES LIDIYVICRL VTIVSRLFFQ
PDAPQLRLLH ISDAWAAFAQ RSIARIAIVL GACTAAVELA GSFGLSDAGH VALLKAVALV
GHLMISALIL RCRQPVAARI RAAGDERPAF AVIGNALADA WAPVAVFVVM ALWFVWALDV
HNGYRVLITL GGRSIAVMVG MRIVSIVVFG ALARLFQRRD DDRTLVHLHA YRYYPLMRQI
VSAVIAVVTV VLLLQTWGVP IFHAFETGTI GHRLASALIT IAIAAVVALL VWEAANIAIE
RRLQLWTREG NLVRAARLRT LLPMLRSLLF ILIALVVVLT GLSEIGVNIG PLLAGASIFG
VALGFGSQKL VQDFITGIFL LMENAMQVGD WVTLAGVSGT VEYLSIRTVR LRAGDGSLYT
IPFSSVTTVN NTNRGLGNAA VKVSIAYGQD IDLAIATLKE IGAALRDDPN YKDGILSDFS
YWGIDQVDGA MIALAGQIQC KDSARWGVQR EFNRRIAVMF RERGIRIANP QRSLVAYDEG
SRPVGPEYDG DAADMPAADT RPAPPPERKP N
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