Gene BamMC406_3549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3549 
Symbol 
ID6181232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp481910 
End bp482320 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content70% 
IMG OID641683318 
Productalcohol dehydrogenase 
Protein accessionYP_001810232 
Protein GI172062581 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.269261 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGCCG GTAGCCCCGC GGACCTGCCG CAACAGGTCG CGGAACTGAC GGGCGGCCGC 
GGCGCGCGCA TCGCGTTCGA TCCGGTCGGC GGCCCAGCCG CGGCGAACCT GCTACGCGCG
CTGCGCACGA ACGGCACGTT CTTCCAGTAC GGCGCGCTCG ACACGCGCGA CATCCCGGTG
CCGGTGATGG ACCTGCTCGC GCGCCATCTG ACGCTGCGCG GCTACGAGCT GTTCGAGATC
ACCGGCGACG CGCAGCGGCT TGAACGCGCG AAGCGCTTCA TCGTCGACGG GCTCGCGGCC
GGCGCGCTGA AGCCGTCGAT CGACCGCACG TTCGCGTTCG ACGACATCGC GCAAGCCCAT
CGGTACATGG AAGCCGGCAC GCAGGTCGGG AAGATCGTCG TGACCGTCTG A
 
Protein sequence
MIAGSPADLP QQVAELTGGR GARIAFDPVG GPAAANLLRA LRTNGTFFQY GALDTRDIPV 
PVMDLLARHL TLRGYELFEI TGDAQRLERA KRFIVDGLAA GALKPSIDRT FAFDDIAQAH
RYMEAGTQVG KIVVTV