7 homologs were found in PanDaTox collection
for query gene BamMC406_3389 on replicon NC_010552
Organism: Burkholderia ambifaria MC40-6



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010552  BamMC406_3389  hypothetical protein  100 
 
 
1351 aa  2784    Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_1921  hypothetical protein  43.38 
 
 
387 aa  97.4  2e-18  Pseudomonas putida KT2440  Bacteria  normal  0.198639  unclonable  0.000000422513 
 
 
-
 
NC_010676  Bphyt_6474  hypothetical protein  36.77 
 
 
1040 aa  96.7  3e-18  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007509  Bcep18194_C6598  hypothetical protein  38.04 
 
 
1058 aa  94  2e-17  Burkholderia sp. 383  Bacteria  hitchhiker  0.000923882  normal 
 
 
-
 
NC_009428  Rsph17025_1421  hypothetical protein  22.72 
 
 
1188 aa  61.2  0.0000001  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.283412  normal 
 
 
-
 
NC_009484  Acry_0802  hypothetical protein  25.73 
 
 
305 aa  58.2  0.000001  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_011991  Avi_9517  hypothetical protein  27.86 
 
 
1290 aa  48.9  0.0007  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
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