| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3381 |
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| Symbol | |
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| ID | 6179180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 298036 |
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| End bp | 299124 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641683150 |
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| Product | porin |
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| Protein accession | YP_001810064 |
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| Protein GI | 172062413 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.573075 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGA GGTTTGGAGC AGTCGCGATG CTTGTCATCG CGCAGGGCGC GTACGCGCAA
AGCAGTGTGA CCTTGTTCGG CCTGATCGAC AGCGGCATCT CGTATGTCAG CAACGAGGGC
GGCGGGAAGA ACGTCAAGTT CGACGACGGC ATCTTCACGC CGAACCTGTT CGGCTTGCGC
GGCACCGAGG ATCTCGGCGG CGGATATCGC GCGACGTTCG CGCTGGTGAA CCAGTTCTCG
ATGGCGAACG GCAGCATCAT CGGCACCGGG ATCTTCGGCC GCAATGCGTA CGTCGGGATC
GAGAGCGACC GCTTCGGCAA CATCACGCTC GGCAACCAGT ACGACTTCAT GGTCGATGCC
CTGTTTGCGA AGGGGAATGC GATTTCGATG GATATCAGCG GGTTGTACGG GTTCAGGAAT
GGCCCGTTCC AGCGTCTTGC GCTGCCGAAC AATCCGACCG GCGCATTCGA TTGGGATCGA
ACGGCGGGCA GCAAGCCTGT GGCGAATTCG GTCAAATACA GTTCGCCGAC GATTGCGGGT
TTCTCCGGCG GCGTGATGTA TGCGTTCGGC GGCGTGGCCG GTTCCATCGG CGCGGACAAC
GCCGTGAGCG CCGGGTTGAA CTACGAAGTC GGGGCGTTCG GTATCGGCGC GGCCTATACG
AACGAGAAGT ACGGACCGGC GCCCGGTACA CCGTCGACCA GTGTGCGCAA CTGGGGCGTC
GGGATGCACT ATGACTTCGG CGCGGTGACC GCGAAGGCGT TGCTGACCAC CGTCCACAAT
TCGTTCAACG ACGCCGGTGT GTGGATGGCT GAAGCCGGTG GCATGTGGCG CATCAGGCCG
GACGTTTTTC TCGGCGCGAA GTACATGTAC ATGAAGGGCA ACGAAGCCGT GAACGACAAC
CACGCGCATC AGGTCAGCGT CGCGCTTCAA TACCTGCTGT CGAAGCGGAC GATGGTGTAT
GTGTCCGGGG ACTACCAACG CGCGAACAGC GGCGCGAACG CGCAGATCAA TGGCGTGCTC
GACCCGAACG GGGCATCTAG TTCAGCGACC CAGGCAGTTG CGCGGATCGG GTTGCATACG
ATGTTTTGA
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| Protein sequence | MKLRFGAVAM LVIAQGAYAQ SSVTLFGLID SGISYVSNEG GGKNVKFDDG IFTPNLFGLR
GTEDLGGGYR ATFALVNQFS MANGSIIGTG IFGRNAYVGI ESDRFGNITL GNQYDFMVDA
LFAKGNAISM DISGLYGFRN GPFQRLALPN NPTGAFDWDR TAGSKPVANS VKYSSPTIAG
FSGGVMYAFG GVAGSIGADN AVSAGLNYEV GAFGIGAAYT NEKYGPAPGT PSTSVRNWGV
GMHYDFGAVT AKALLTTVHN SFNDAGVWMA EAGGMWRIRP DVFLGAKYMY MKGNEAVNDN
HAHQVSVALQ YLLSKRTMVY VSGDYQRANS GANAQINGVL DPNGASSSAT QAVARIGLHT
MF
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