Gene BamMC406_3346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3346 
Symbol 
ID6180627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp256264 
End bp256632 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content64% 
IMG OID641683115 
ProductRND family efflux transporter MFP subunit 
Protein accessionYP_001810029 
Protein GI172062378 
COG category[S] Function unknown 
COG ID[COG5569] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATGA ATCAACTGAT CGCCACTGCC GCCGCCGCTC TCGCGACCGG CGCGTTCGCC 
GTACCCGCGT TTGCCGCGGG CGACATGTCG GGCATGGAGA TGTCCGGCAT GAAGATGTCG
TCCGGCGGCG CGGCCGAATC GGGCACGGCG CTGACTGATG CGGAAGTGAA GAAGGTCGAT
GCCGCGAGCG GCAAAATTAC GCTGAAGCAC GGCGCACTGG AGAACGTCGA CATGCCGTCG
ATGACGATGG CGTTCAAGGC GAAGGACGCG GCGATGCTCG CCGGGGTTCA TGCGGGCGAC
AAGGTGAGGG TGCGCGTCGA GCGCGTCAAC GGCACGCTGA CGATCGTCAA GCTCGAGAAG
GCATCGTAA
 
Protein sequence
MKMNQLIATA AAALATGAFA VPAFAAGDMS GMEMSGMKMS SGGAAESGTA LTDAEVKKVD 
AASGKITLKH GALENVDMPS MTMAFKAKDA AMLAGVHAGD KVRVRVERVN GTLTIVKLEK
AS