| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3262 |
|---|
| Symbol | |
|---|
| ID | 6179795 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | - |
|---|
| Start bp | 168340 |
|---|
| End bp | 169149 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641683036 |
|---|
| Product | redoxin domain-containing protein |
|---|
| Protein accession | YP_001809950 |
|---|
| Protein GI | 172062299 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0170639 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.755125 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAGCA TCGGTCCCTT CTCGATCCGC GTCGTCGCGG TAGCCGCCGC CGCGCTGATC
GCATGGCTCG TCGCCCGCTT CATGCAGCGC CGGCCGCCGG ACGGCCAGCA CAAGAGCGCG
GCGAGCCTGA TCCTCGACAC GCTGCTGCTT GGCCTGATCG CCGCGCGCGT CGGTTACGTC
GGTCAATGGT GGTCCGAGTA TTCAGCCGCC CCGCGCTCGA TCGTCGCGCT CGGCGACGGC
GGCTTCGACT GGCGCATCGG CGTCGCCGCG GCGCTCGTGT TCGCCGGCTG GCGACTGCGC
CGCCTGCCTG CGCTGCGTCG CCCGGTGCTG GCCGGCATGC TGGCGGGGTT CGCCGCGTGG
GGCATCGCGC AAGGCACGCT CGCGACGTTG CAGCGCGGTG CGCCGCCGCT TGCGGCGATG
CGTCTCGAAG CGCTCGACGC GACGCCCGTC GCGCCGCAGC GCTTTGCCGG CAAACCCGTC
GTCGTCAATC TGTGGGCCAC CTGGTGCCCG CCGTGCCAGC GCGAAATGCC GATCCTCGCG
CAGGCGCAGC AGGATCATCC GGACATCACG GTGCTGATGG TCAACCAGGG CGAAGACGCG
CAAACCGTGC GCGCGTTTCT CGAACGGAAG GGGTTGCGGT TCGATCACGT GCTGCTCGAT
CGCACGCTGC ATACGATGAA GGCCTACGGT TCGCACGGGC TGCCGACGAC GCTGTTCTTC
GACGCGAACG GCAATCTCGT CGAATCGCAC ATGGGCGAGA TCACCGCCGC GCGGCTGAAG
GACACCGTGA GCGCGGGCCT GCGGCGCTGA
|
|---|
| Protein sequence | MLSIGPFSIR VVAVAAAALI AWLVARFMQR RPPDGQHKSA ASLILDTLLL GLIAARVGYV
GQWWSEYSAA PRSIVALGDG GFDWRIGVAA ALVFAGWRLR RLPALRRPVL AGMLAGFAAW
GIAQGTLATL QRGAPPLAAM RLEALDATPV APQRFAGKPV VVNLWATWCP PCQREMPILA
QAQQDHPDIT VLMVNQGEDA QTVRAFLERK GLRFDHVLLD RTLHTMKAYG SHGLPTTLFF
DANGNLVESH MGEITAARLK DTVSAGLRR
|
|---|
| |