Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3029 |
Symbol | |
ID | 6178975 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 3359955 |
End bp | 3361622 |
Gene Length | 1668 bp |
Protein Length | 555 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641682805 |
Product | OmpA/MotB domain-containing protein |
Protein accession | YP_001809721 |
Protein GI | 172062069 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATGC GATCGATGAA GGAGACCGTA CTCGTCTGGA TCGCAATGCC GATCGTCGTG TTCGGCGGCG CGTGGGCACT GGCCGGGCTG CCCGATTGGC AAAGCGCGTT ATGCATCGCA TTGGCGGTCG CGTTCGCGAT GTGGGTTGCC GCGTGGTCGG AGCGTCGGCG CCCGGTGGAG GCTTCCGCCG AGCCTGCCGA ACAAGCGATC GGCAGCACGG CGCGCGAACT CGAGGTGATC GTCGTCGTCG GGCCCTATGC GGCCGCGCTG TTTCCACGCG ACGGCGGGCG GGCGACGCTC AGGCGCGACG ACCGGGCGGT GTGGCTGCTG GCCGATACGC CGACGCGGCT GAACGATGTA ATGACGCAAG TCAAGGCGGC GCGAGGGCGT TTCCCGGACG CCGCGCTGCT GCCGGTGGTA CCGGAGGGCG ATGACGAAAG CGTATTGCGT CGAGAGTTCG CGCAATGGCG CATTGCACTG CAGGCGGCGT ATTGCCATCC CGAATGCGTG TTGCCTTGTC ACGTCGCGGT GTATGCGTGT CTGGGGCCGG GCGAGGACGG CACGCCGCAA ACGCGATGGT TTGGCGATGC GCTCGAATTC AACGCTCCGC ACGTCACGGA GGCAATCGGG CTGTCCGACC GGTTGCCGGC GATCCGCGGC AGCCTGGCCG AGTCGCGGCA CGCCGAGGCG GCCGTGCGGA GCGCACTGGG GCTCGCGGTA TTCGAATGGC TCGACGAGGC GGCGTTGCTG TCGTCGATCT CCGCGTTGTC GAATACCGTG CCGTTTGCGC TACAGGGCGC TTCGCTGGCG GACATCGACC ATACGCCGAT TCGGCCGGGC GCATGGACCC GCTGGCTGAT TGCCAGAACC GGCCTGCAGC CACGCGTGAC GAAGCCGGTG GCGGGGCCGC TTCCGCTGCC GCGTATTCAC GCGTCGGCTC CAGGTTCAGC GGGTCCGGCC AAGCGGCACC TGCTGCCATC GCCGGTCAAC CGGAGGGAGT GGCCGCTCGC GTCACACGTG CTGCTGTCGA GTGTGGTTGC CACGACCGTA GCCGTGGCCA TATCGGGCGC AGTGAATTAT CGGATCGTCG AGCGGATCTC GGATGACCTG TCTGCCTATT GGAACACGCC GGCCGTCCGG ATCACCGCGT CGATCGACTC GTTCGAGCGG CTGCGTGCGG CGCGCGACGA AGTGGCGCGC AATCTGCGCG ACGGCGCGCC GTTCGGCGCG GGCTGGGGAC TATATCCGGG GCGCGCGCTG TTGCCTCGCG TCGACGTAGC GCTGACGGCC TATCAGCCGC CGCTCACGAC CGTACAGATC GATAGCCTTT CGCTGTTTGC AAGCGGCAAG GCAACATTTT CCCCTGCTCA CGAACGTCGC GAACTGGCGC ATGTGCTTCG GCTGATCCGC GAGAATCCGG ACCAGCGCGT GCTGATCGAG GGGCATGCGG ACAGTGAGGG ATCGGCCGAC GCGAACCTTC GGCTGTCCGA AGCACGGGCG CGTGCGATCC GCGATTGGCT TGTCGCCGAA GGCGGGTTGT CGGTCGCGCG TTTCGCGATT CAAGGAATGG GCGACATCCG TCCGATCGCG GACAACCGCA GCGAGGCGGG CCGGGCATTG AACAGGCGTG TCGACGTTTC GCTGATCCCG GACGGCGTGC GTCATTGA
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Protein sequence | MSMRSMKETV LVWIAMPIVV FGGAWALAGL PDWQSALCIA LAVAFAMWVA AWSERRRPVE ASAEPAEQAI GSTARELEVI VVVGPYAAAL FPRDGGRATL RRDDRAVWLL ADTPTRLNDV MTQVKAARGR FPDAALLPVV PEGDDESVLR REFAQWRIAL QAAYCHPECV LPCHVAVYAC LGPGEDGTPQ TRWFGDALEF NAPHVTEAIG LSDRLPAIRG SLAESRHAEA AVRSALGLAV FEWLDEAALL SSISALSNTV PFALQGASLA DIDHTPIRPG AWTRWLIART GLQPRVTKPV AGPLPLPRIH ASAPGSAGPA KRHLLPSPVN RREWPLASHV LLSSVVATTV AVAISGAVNY RIVERISDDL SAYWNTPAVR ITASIDSFER LRAARDEVAR NLRDGAPFGA GWGLYPGRAL LPRVDVALTA YQPPLTTVQI DSLSLFASGK ATFSPAHERR ELAHVLRLIR ENPDQRVLIE GHADSEGSAD ANLRLSEARA RAIRDWLVAE GGLSVARFAI QGMGDIRPIA DNRSEAGRAL NRRVDVSLIP DGVRH
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