| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2821 |
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| Symbol | |
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| ID | 6177575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 3125938 |
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| End bp | 3127164 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641682597 |
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| Product | patatin |
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| Protein accession | YP_001809513 |
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| Protein GI | 172061861 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.438344 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCTCG CGCTCGTTCT GATGGGGGGG GGCGCCCGCG CCGCCTACCA GGTCGGCGTG
CTGAAGGCGC TGGCCGAGAT CGCGCGAGAG GCCGATCCGC AGCGGCATAC GGTGCCGTTT
TCGGTCGTAT GCGGCTCGTC GGCCGGCGCG ATCAATGCAA CGTCGATCGC GAGCCACGCG
GACGATTTTT CGCACGGCGT GCGGCGCCTG CTCGAATTCT GGGAGCCGCT GCGCGCGGAC
TACGTGTATC GCACCGACTG GCTCGGCATC GCGGCGGCGG GTGCACGCTG GCTCGCGGCG
ATGAGCTTCG GCTGGGCGGC ACGCCGTTCG CCGCGCGGGC TGCTCGACAA CACGCCGCTC
GCGCACCTGC TGCAGCGCGA GCTGAGTTTC CACCGGATCG AGCAGATGCT CGAGAGCCGG
CTGCTGCATG CGTTGTCGAT CACGGCGCTC AGCTATTCGA GCGGACGGCA CCTGACGTTC
TACCAGGCCG CCGAGCCGAT CCAGGCATGG CGGCGCGCGC AGCGCACCGC ACGGCTCGTC
GACCTGTCGG CGTCGCACCT GCTCGCGTCG TCGGCCATTC CGTTCGTGTT CCCGGCCGTG
CCGCTCGTGC TCGACGGACA GGTCGAGTAC TTCGGCGACG GGTCGATCCG GCAGGTCGCG
CCGCTGTCGC CGGCGATCCA CTTCGGCGCG AACCGGATCG TCGTGATCGG CGCGGCCGAT
CCGCGGCCCG AGATTCCCGC CGCGAACGGT TCGGGGCGGG TGCGCGGCTA TCCGACGCTC
GCGCAGATCG GCCAGCAGGT GCTCGCGAGC GTGTTTCTCG ACTCGATCGG CGCGGACATC
GAGCGCATCG AGCACATCAA CCGGATGATC GAGCACCTGC CGCAGCAGGT CGAGGTGGAC
AGCGGCTGGC GGCACGTCGA CGTGCTCGCG ATCGCGCCGT CCGAGCCCAT CGAGCTGATC
GCCGCGAAAC ACCTGAAGCA GATGCCGGCG ACGATGCGCG GGCTGCTCGG CGCGATCGGC
GGCAGCCAGC CGGCCGGCGC GTCGTTCGCG AGCTACCTGC TGTTCGAGGA GGCGTTCACG
CGCGAGCTGA TCGAGCTCGG CTACCGCGAC GGGCGCGCGC AGCGCGACAC GCTGGCGAGC
TGGATCGCGG GCGCCGACGG CTGCAGCGCG CCGCCGACGG GCACGCCGCC GGAGGGCGGC
ATCGCGACGG GGGAAATACG GGTCTGA
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| Protein sequence | MRLALVLMGG GARAAYQVGV LKALAEIARE ADPQRHTVPF SVVCGSSAGA INATSIASHA
DDFSHGVRRL LEFWEPLRAD YVYRTDWLGI AAAGARWLAA MSFGWAARRS PRGLLDNTPL
AHLLQRELSF HRIEQMLESR LLHALSITAL SYSSGRHLTF YQAAEPIQAW RRAQRTARLV
DLSASHLLAS SAIPFVFPAV PLVLDGQVEY FGDGSIRQVA PLSPAIHFGA NRIVVIGAAD
PRPEIPAANG SGRVRGYPTL AQIGQQVLAS VFLDSIGADI ERIEHINRMI EHLPQQVEVD
SGWRHVDVLA IAPSEPIELI AAKHLKQMPA TMRGLLGAIG GSQPAGASFA SYLLFEEAFT
RELIELGYRD GRAQRDTLAS WIAGADGCSA PPTGTPPEGG IATGEIRV
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