Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2821 |
Symbol | |
ID | 6177575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 3125938 |
End bp | 3127164 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641682597 |
Product | patatin |
Protein accession | YP_001809513 |
Protein GI | 172061861 |
COG category | [R] General function prediction only |
COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.438344 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCTCG CGCTCGTTCT GATGGGGGGG GGCGCCCGCG CCGCCTACCA GGTCGGCGTG CTGAAGGCGC TGGCCGAGAT CGCGCGAGAG GCCGATCCGC AGCGGCATAC GGTGCCGTTT TCGGTCGTAT GCGGCTCGTC GGCCGGCGCG ATCAATGCAA CGTCGATCGC GAGCCACGCG GACGATTTTT CGCACGGCGT GCGGCGCCTG CTCGAATTCT GGGAGCCGCT GCGCGCGGAC TACGTGTATC GCACCGACTG GCTCGGCATC GCGGCGGCGG GTGCACGCTG GCTCGCGGCG ATGAGCTTCG GCTGGGCGGC ACGCCGTTCG CCGCGCGGGC TGCTCGACAA CACGCCGCTC GCGCACCTGC TGCAGCGCGA GCTGAGTTTC CACCGGATCG AGCAGATGCT CGAGAGCCGG CTGCTGCATG CGTTGTCGAT CACGGCGCTC AGCTATTCGA GCGGACGGCA CCTGACGTTC TACCAGGCCG CCGAGCCGAT CCAGGCATGG CGGCGCGCGC AGCGCACCGC ACGGCTCGTC GACCTGTCGG CGTCGCACCT GCTCGCGTCG TCGGCCATTC CGTTCGTGTT CCCGGCCGTG CCGCTCGTGC TCGACGGACA GGTCGAGTAC TTCGGCGACG GGTCGATCCG GCAGGTCGCG CCGCTGTCGC CGGCGATCCA CTTCGGCGCG AACCGGATCG TCGTGATCGG CGCGGCCGAT CCGCGGCCCG AGATTCCCGC CGCGAACGGT TCGGGGCGGG TGCGCGGCTA TCCGACGCTC GCGCAGATCG GCCAGCAGGT GCTCGCGAGC GTGTTTCTCG ACTCGATCGG CGCGGACATC GAGCGCATCG AGCACATCAA CCGGATGATC GAGCACCTGC CGCAGCAGGT CGAGGTGGAC AGCGGCTGGC GGCACGTCGA CGTGCTCGCG ATCGCGCCGT CCGAGCCCAT CGAGCTGATC GCCGCGAAAC ACCTGAAGCA GATGCCGGCG ACGATGCGCG GGCTGCTCGG CGCGATCGGC GGCAGCCAGC CGGCCGGCGC GTCGTTCGCG AGCTACCTGC TGTTCGAGGA GGCGTTCACG CGCGAGCTGA TCGAGCTCGG CTACCGCGAC GGGCGCGCGC AGCGCGACAC GCTGGCGAGC TGGATCGCGG GCGCCGACGG CTGCAGCGCG CCGCCGACGG GCACGCCGCC GGAGGGCGGC ATCGCGACGG GGGAAATACG GGTCTGA
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Protein sequence | MRLALVLMGG GARAAYQVGV LKALAEIARE ADPQRHTVPF SVVCGSSAGA INATSIASHA DDFSHGVRRL LEFWEPLRAD YVYRTDWLGI AAAGARWLAA MSFGWAARRS PRGLLDNTPL AHLLQRELSF HRIEQMLESR LLHALSITAL SYSSGRHLTF YQAAEPIQAW RRAQRTARLV DLSASHLLAS SAIPFVFPAV PLVLDGQVEY FGDGSIRQVA PLSPAIHFGA NRIVVIGAAD PRPEIPAANG SGRVRGYPTL AQIGQQVLAS VFLDSIGADI ERIEHINRMI EHLPQQVEVD SGWRHVDVLA IAPSEPIELI AAKHLKQMPA TMRGLLGAIG GSQPAGASFA SYLLFEEAFT RELIELGYRD GRAQRDTLAS WIAGADGCSA PPTGTPPEGG IATGEIRV
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