| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1784 |
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| Symbol | |
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| ID | 6176596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1990381 |
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| End bp | 1991283 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641681543 |
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| Product | putative transmembrane anti-sigma factor |
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| Protein accession | YP_001808485 |
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| Protein GI | 172060833 |
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| COG category | [K] Transcription |
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| COG ID | [COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTGTA ACGAAGCGCG AGCCTTGCTG GACGCGGACG TCGACCGCGA GCTGTCGGCG
CCCGATGCGT TGCGCGTCCA GCGGCATGTC GACGGGTGCG ACGCGTGCCG CCGCGAACGC
GAGCGGATCG TCGTGCTGGG GCGGGCCGTG CGGCAGGCCG GTTATCACCG CGCGCCCGAT
GCGCTGCGGG CGAGCATCCT CGCGGCGCTG CCGGCGACAG GCGGCGCGAG CGAGCGCGGG
CCGGCCGCGG CGGCGCCGGA GCCGGAGCCC GATGCGGCGC CGCGCCCGCG GCCTCGATCG
AGCGGGCGCC GCTGGTTCTG GTGGCCGGCC GGACGCGGCG TATCGGCTCG CCCGGGTTCT
GCCGGGCCGG GGCCGCGCGT CACGGCGGTG CCTGGGCTCG GCTGGGGCGT GGCGCTGGTG
GTCGCGCTCG CCGCGGCGGC CGGGATGACG CTGTCCGCCC GTCACGCCGA AACCGGCCAG
ATGGTCGACG AGCTGGTCGC GAGCCACGTG CGGGCCGGCC TGTCGGCGCG CGACATCGAC
GTAATTTCGA CCGACCGGCA TACGGTCAAG CCGTGGTTCA ACGGCCGGCT CGACTATGCG
CCGCCGGTCG AGGACCTGTC GGCGAGCGGC TTCCCGCTCG TGGGCGGCCG ACTCGACTAC
GTCGGGCGGC GCCGCGTCGC GGTGCTCGTG TACCGATACC GGCAGCACGT GATCGACTTG
TATGTGCGGC CGGCGGGCGG CGGGGAGACG GCGCCGTACG CGACCGTGTC GCAGGGCTAC
GCGCTCGACC GCTGGGAGGC GGCCGGGATG ACCTGGTGGG CCGTGACCGA CGCCGAGCCG
TCGGCGCTCG CCGCGTTCAG GACGGCGCTC GACGCGCGGC TGGGCGGGGC GCGCAGCGAG
TGA
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| Protein sequence | MDCNEARALL DADVDRELSA PDALRVQRHV DGCDACRRER ERIVVLGRAV RQAGYHRAPD
ALRASILAAL PATGGASERG PAAAAPEPEP DAAPRPRPRS SGRRWFWWPA GRGVSARPGS
AGPGPRVTAV PGLGWGVALV VALAAAAGMT LSARHAETGQ MVDELVASHV RAGLSARDID
VISTDRHTVK PWFNGRLDYA PPVEDLSASG FPLVGGRLDY VGRRRVAVLV YRYRQHVIDL
YVRPAGGGET APYATVSQGY ALDRWEAAGM TWWAVTDAEP SALAAFRTAL DARLGGARSE
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