| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1601 |
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| Symbol | |
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| ID | 6178126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1794628 |
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| End bp | 1795752 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641681362 |
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| Product | porin |
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| Protein accession | YP_001808304 |
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| Protein GI | 172060652 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.32825 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.100291 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACGA AACTGGCCGC GCTCGCGGCG CTTGCCGGCT GTTCGGCGTT CGCGCATGCG
CAATCCTCCT TCACGCTGTA CGGCGTGGTC GACACGGGCC TGCTGTACCA GAGCACGTCG
GCCGCTTCGT TCCGCCCGAA CGCGCCGAAC ACCGGCAAGG TGTTCCGGAT GAAGGACGGC
GGCATCTATT CGAGCTTCTG GGGGATCAAG GGCAGCGAGG ACCTCGGCGG CGGCTACAAG
GTCAACTTCA AGCTGCAGGG TTCGTTCGAC AGCGGCACCG GCCGGCTCCA GCTGAGCGAC
ACGCCGGGCG CCGTCGCGAT CTTCAACCAG ATTGCGTCGC TCGGCGTATC GGGGCCGTTC
GGCACGGTGA CGGCCGGCCG CCAGATCGTG CCGATGATCT ACGCGATGGC CGACACCGAC
GTGCGCAACG CGCAGTTCTT CGGCAGCGTG CTGACCGCGT GGCTCGGCCT GAATACTGCG
GCCGGCTGGC CGGCGACGAG CACCAACGGC GCGATCGGCG CGCTGTACGA CAGCAATGCG
CTCGTGTATC AGTCGCCGAC GTTCGGGGGC GTGTCGCTCG CGCTCGAATA CGCACCCGGC
GGCGTCGCCG GACAGTTTCA GGGCGGCACG CGCGAGTCGG TCGTGCTCCG GTATTCGAAC
TACGGGCTCA ATGCATCGGC CGTCTACTAC AACGGCCACG ACACGAATCC GGCACCGGGT
GTCGCGCCCA CCGGCGTCGA CAACAACCGC TTCGTCTACG TCGGCGCGAA ATACACGGTC
CGCGATTTCT CGGTGTCGGC GTCGTACGGC AACGGCCGGA ATCCCGCGCA TGCGGACCGC
GTGAACCTCG ACATGCTGTC GGCCGGTGTC GGCTATCGCT TCACGCCCGC GCTGCAGGTC
GCCTCCGCCG TGTACTACCT GAAGGATCGC AACCGCGCCA CGAACCGGTC GACGGCCGTC
GTGCTCACGG CCGACTACAG CCTGTCGAAG CGGACGATGG TCTATGCGCA GGCCGGCCAC
GTGAACAACC GCGGCACGAT GGACCAGATG CTGGTGTACG GGCAGCCGGT CGCGCCCGGC
GTCGGCACGA CGGCCGCGAT GGTCGGGCTG CGGCACAACT TCTGA
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| Protein sequence | MKTKLAALAA LAGCSAFAHA QSSFTLYGVV DTGLLYQSTS AASFRPNAPN TGKVFRMKDG
GIYSSFWGIK GSEDLGGGYK VNFKLQGSFD SGTGRLQLSD TPGAVAIFNQ IASLGVSGPF
GTVTAGRQIV PMIYAMADTD VRNAQFFGSV LTAWLGLNTA AGWPATSTNG AIGALYDSNA
LVYQSPTFGG VSLALEYAPG GVAGQFQGGT RESVVLRYSN YGLNASAVYY NGHDTNPAPG
VAPTGVDNNR FVYVGAKYTV RDFSVSASYG NGRNPAHADR VNLDMLSAGV GYRFTPALQV
ASAVYYLKDR NRATNRSTAV VLTADYSLSK RTMVYAQAGH VNNRGTMDQM LVYGQPVAPG
VGTTAAMVGL RHNF
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