| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1588 |
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| Symbol | |
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| ID | 6178261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1780348 |
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| End bp | 1781703 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641681349 |
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| Product | lysozyme |
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| Protein accession | YP_001808291 |
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| Protein GI | 172060639 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3979] Uncharacterized protein contain chitin-binding domain type 3 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.421382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.415988 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAACA CCGTGTTGTC GCGATTCAAC CCGCGCGCAC TCGTCGCGGG CTGCCTGCTC
GCCGTCGCGA GCGTGTCCCA CGGCGCCGGC GTCTATGCGC CGTTCGTCGA CGTGACGCTC
TACCCGACGC CGCTCGTCGA CCGGATCGGC GTCCAGCAAG GCATCCAGCA GTTCACGCTC
GCGTTCGTGA CCGCGGGCAA CGGTTGTGCG CCGTCCTGGG GCGGCGTGCA GCCGATCGGC
AACGGTGCGA GCGGCGATCT GCTCGCGTCG CTGTCGACGT CGATCGCGAG CTATCGCGCG
AAAGGCGGCG AGATCGCGGT CTCGTTCGGC GGCGCGAACG GCACGCCGCT GATGCAGGCG
TGCTCGACCG TCCCCGCGCT GAAGACGGCC TACCAGACCG TGATCGACAC CTACGGCCTC
ACGCATGTCG ACTTCGACAT CGAGGGCGCA TCGCAGCAGG ACAGCGCCGC GGTCGCCCGC
AACTTCCAGG CGGTTGCGCA GTTGCAGTCC GACTACGCGG CGAAAGGCCG GCCGCTGCAC
GTCACGCTGA CGCTGCCGAC GATGCCGACC GGGCTCACGC AGGATGGCGT GAACGTCGTG
ACCGCGGCCA TCGCGAACAA GGTCGCGTTC GACGCGGTGA ACCTGATGAC GATGGACTAC
GGCTCCGCGA ACATCGACAT GGGCGCGGCG GCGATCAGCG CCGCGCAGGC GCTCTACGCG
CAGCTCGACA CGGCGTTCAA GTCGGCCGGC CAGCCGAAGA CCGGCGCGCA ACTCTGGCAG
ATGGTCGGGG TCACGCCGAT GATCGGGATG AACGACGTGC AGGGCGAAAC CTTCACGCTC
GCCAATGCGC AGAGCGTGCT GAATACGGCG CTCAACAACG GTTACGGTTT CTTCGGTAAC
TGGTCGGTCG GCCGCGACCA GCCGTGCCCG AACAACGGCG CGTATGTGTC GCCGACCTGC
TCGGGCATCG CGCAGCAGCC GTACGCGTTC GCGTCGATCT TCCGCAAGCT CGACGGCAAG
TGGGGCGCGG GCGTCACGCA GGACCCGAAC TACGGCGGCG GCTCGAACGG CGGAACGCCG
CAGCCCGGCG CGCCCTGGTC GGCCGCCCAG GTCTATACGG CCGGCGCGAC GGTCACCTAT
CAGGGCACGA CGTACCAGGC GCAATGGTGG ACGCAGGGCG ACGTGCCGGG CCAGGCGAGC
GTGTGGAAAG CGATCGGCGG CGGCACGGCG ACGTGGTCGG CAACGACCGC GTACCAGGGC
GGCACGTGCG TGATGTATCA GGGCGCGAAA TACTGCGCGA AATGGTGGAC GCAAGGCGAC
AACCCGAGCG CCGGCGGCGT GTGGGTGAAG TCGTGA
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| Protein sequence | MNNTVLSRFN PRALVAGCLL AVASVSHGAG VYAPFVDVTL YPTPLVDRIG VQQGIQQFTL
AFVTAGNGCA PSWGGVQPIG NGASGDLLAS LSTSIASYRA KGGEIAVSFG GANGTPLMQA
CSTVPALKTA YQTVIDTYGL THVDFDIEGA SQQDSAAVAR NFQAVAQLQS DYAAKGRPLH
VTLTLPTMPT GLTQDGVNVV TAAIANKVAF DAVNLMTMDY GSANIDMGAA AISAAQALYA
QLDTAFKSAG QPKTGAQLWQ MVGVTPMIGM NDVQGETFTL ANAQSVLNTA LNNGYGFFGN
WSVGRDQPCP NNGAYVSPTC SGIAQQPYAF ASIFRKLDGK WGAGVTQDPN YGGGSNGGTP
QPGAPWSAAQ VYTAGATVTY QGTTYQAQWW TQGDVPGQAS VWKAIGGGTA TWSATTAYQG
GTCVMYQGAK YCAKWWTQGD NPSAGGVWVK S
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