| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0540 |
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| Symbol | |
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| ID | 6177947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 609790 |
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| End bp | 611400 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641680288 |
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| Product | peptidase S10 serine carboxypeptidase |
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| Protein accession | YP_001807253 |
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| Protein GI | 172059601 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2939] Carboxypeptidase C (cathepsin A) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.721238 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGCGA GCAAAGCGAA GCTGTTGTTG GGAGTTGTGT TCTCTTCGCT GATTCTGACG
GCCTGCAACG ACGACGTGAC GTCGTCCGCC GCAACAGGTG CCGCCAACTC AGCCGATCCC
GCCGCTCAGG TGGACAGGCC GTACAACGAT CCCAACAGTT ATTCGTCGAG CGCGACCGCG
TCGCTCGACG CGTCCGCCGC GGTCGAGAAG GCCGCCGTCA CCCATCACCA GATCACGCTG
AACGGCCAGA CGATCCGCTA CACGGCCACC GCCGGCCACC TCGTCGCGCG CAATCCGCAG
ACGGGCGCGC CCGAAGCGTC GTTCTTCTAC ATCGCATACA CCGCTGACAA CCAACCCGCC
GCGAAGCGGC CCGTCACGTT CCTGTACAAC GGCGGCCCCG GTTCCGCATC GGTGTGGCTG
CATCTCGGCT CGTTCGGCCC GAAACGGATC CAGACGGGCG ACCCGAACGC GAACACGTCG
ACGTTCCCGT TCGTCGACAA CGCGGAGAGC CTGCTCGACA CGACTGACCT CGTGTTCGTC
GATGCGATCG GCACCGGCTT CTCGGAAGCG ATCGCGCCGA ACACGAACCA GACGTTCTGG
GGTGTCGACC AGGACGGTGG CGCGTTTCGC GATTTCGTGA TGCGCTACCT CGCCGTGAAC
CAGCGCAACG ATTCGCCGAA ATACCTGTTC GGCGAATCGT ATGGCACGCC GCGCACCGAC
GTGCTCGCGA ACCTGCTCGA AACGGCCGGC GTGAAGCTCG CCGGCATCGT GCTGCAGTCG
TCGATCCTGA ACTACAACGC GAACTGCGAC ATGGCGAGCG ACTACATCGG CAACTCGAAC
AACGGGTCGA GCCCGGTGAG CTGCGCGGGC TTCGTGCCGT CGTACGGCGC CGTCGGCGCG
TACTACCAGC TCGACAATCC GAACCCGTCG AGCCTGCCGC AGTATGCGGA CCAGATGCGG
CTGCTGACGG CCGGCAGCTA CGCGCCCGCC GTGAACGCGT ATCTCGCGAG CCGCACGCCG
CCTCCGCCGA CGCTCGTCAC GACGATGGTG AATTCGACCG GCGTGAAGCA GTCGCTGTGG
AATGCGGACT TCAACGTGGT CCCGACGTTC TTCGACAACA GCTTCCAGGT GGCGCTGATC
CCGGGCACGC TGATCGGCCG CTACGACGCA CGCGTGAACG TGCCGTCGTC GAGCCCGCTC
GCGGCCGACG GCGACCCGTC GAGCACGTTC ATCACGAAGC CGTTCACCGA CACGATCGGC
AGCTACCTGC CGAACGTGCT GAAGTACAGC GCGCAGTCCG CGTATTCGCT GAGCAGCAAC
GCGATCAACA CGTGGGACTG GTCGCACGAC GGCCTCGCGA TGCCCGACAC GATCCCCGAT
CTCGCCGCGG CGCTGACGCT CAATCCGTCG CTGAAGGTGC TGTCGCTGAA CGGGTATCAC
GACATCGCGA CGCCGTTCTA CCAGACCGAG CTGGACCTCG CGCGGCTCGG GTCGCAACCG
AACCTGACGA TCAAGGACTA TCAGGGTGGA CACATGGTCT ATCTCGACGA TACGTCGCGT
CCGCAGGAGA AGGCCGACCT CGTGACCTTC TACAACGCGG CCGCGCATTG A
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| Protein sequence | MPASKAKLLL GVVFSSLILT ACNDDVTSSA ATGAANSADP AAQVDRPYND PNSYSSSATA
SLDASAAVEK AAVTHHQITL NGQTIRYTAT AGHLVARNPQ TGAPEASFFY IAYTADNQPA
AKRPVTFLYN GGPGSASVWL HLGSFGPKRI QTGDPNANTS TFPFVDNAES LLDTTDLVFV
DAIGTGFSEA IAPNTNQTFW GVDQDGGAFR DFVMRYLAVN QRNDSPKYLF GESYGTPRTD
VLANLLETAG VKLAGIVLQS SILNYNANCD MASDYIGNSN NGSSPVSCAG FVPSYGAVGA
YYQLDNPNPS SLPQYADQMR LLTAGSYAPA VNAYLASRTP PPPTLVTTMV NSTGVKQSLW
NADFNVVPTF FDNSFQVALI PGTLIGRYDA RVNVPSSSPL AADGDPSSTF ITKPFTDTIG
SYLPNVLKYS AQSAYSLSSN AINTWDWSHD GLAMPDTIPD LAAALTLNPS LKVLSLNGYH
DIATPFYQTE LDLARLGSQP NLTIKDYQGG HMVYLDDTSR PQEKADLVTF YNAAAH
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