| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A0127 |
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| Symbol | |
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| ID | 4888440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 668 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009075 |
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| Strand | + |
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| Start bp | 108223 |
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| End bp | 111009 |
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| Gene Length | 2787 bp |
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| Protein Length | 928 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640130068 |
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| Product | putative Rhs element Vgr protein |
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| Protein accession | YP_001061133 |
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| Protein GI | 126444328 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCAATT TGAACGATAC GCTACGCAAT TTTGCGTCGG GGGCGGTCGA CTGGAATAAA
CGTCCGGTCG CGTTGCACTT TGGCGCCGCG CAGGCCGCGC TGGGCCACCT CCTCGCGCTG
CAGCACGCCA GTGTTCAGGA AGGCCTGATG ACCGGGATCC ACGGCCGATT GACCTGCGTG
TCGACCCGCC GCGATCTTCC GCCCGGCGTG TTGCTCGGCA TTCCGGTTTC GATCCGGCTC
ATTACCGACC GCGGACAGCC GCACACGGTG AACGCGATCA TCAGCGACGT CCAGATCGGC
CAAAGCGACG GCGAGCTCTG TGTGTACCAG CTGACGGTCT GCGACGCGCT GTCGCTGATG
GACAAGCGCA CCAATTCGCG GGTCTTCCGA AAGCGCAGCG TCATCGAGGT GCTCGCCACG
CTGTTCAACG AATGGCAGCA GCGCAGCCCG GCCCTCGCGC GCGCGTTCGA ATTCGATCTG
TCCGGCTTGC GCGCCGATCG CTATCCGCCC CGCGAGCTGA CCCGGCAGGT CAACGAATCG
GATGCGCATT TCGTGCGCCG TCTGCTGCGC CGCGAAGGGA TCACCGTGTT CGCGAAGGCG
GGGCCGGCGA AGGGCGAACG GCCGTTGCAG GGCGACGCGC CCGTGCACAC GCTCGTGTGC
TGTGACGATC CGATGTCGTT GCCGCAAGCG CCGGCCGGCA CGGTCCGCTT GCATCCGCGC
GACGGCGGCG CCGCGCAGCG CGACACGGTC ACGCTGTTCG CGCTGCGTCG GCAATTGGCG
CCCGGCAAGG CCGGGCGCCC GTCGTGGGAC TACAAGAAGG CGCGGATCGA CGAATCGAGC
GTCGCTTCGA GCCTCGATCA GGGCGAGGCG GGCAACGATC TGGCGAAGCT GCTGACCGAC
ATCGCGATCG ACATTGCGCA CGCGGGCGAT TCATGGCGCG ATCACGAGCG GCTCACCCGC
GCGCGCATGC TCGCGCACGA GTTCGAAGCC GAGCGCCATG ACGGCGTCAG CAGCGTGCGG
GATCTGGCCG TGGGCGCGTG GATCACGCTG ACGGGCGATC CGGACTGGGA CAGGCAACTC
GCCGACAAGC GCCAGTTCGT GATCACGTCG ATCGATCACG ACATCTGGAA CAACCTGCCG
AAGGGGCTCA ACGAGCGCGT GCACGCGCTG TTCGCCGCGA GCCGCAATCT CGCGTGCGCG
CCCCGCGCGC TGCCGTCCGC GCTGGCGAAC GACGCGGATA CCCGCTACGA GAACACGTTC
ACGTGCGTGC GCCGCGGCGT GCCGCTTGCG CCCGCGTACG ATCCGCAAGC CGATTTGCCG
CCCGCGCATC TGCTCACGGG CACGATTGTC GGCGCGGAGG GCGAAGAAGT GTTCTGCGAC
GAAGACGGCC GGGTGCGCGT GCGGTTGCAC GGCCTCGATC CGGCGGATCA CGCGCACGCG
CAGGGCGCGG GCACCAACGG CAACGCGGGC GACAGCGCGC CGATCCGCGT GGCGTCGAGC
CTCGCCGGCG CCTATTTCGG CGCATCGTTT CTGCCGCGCG TCGGCATGGA AGTCCTCCTC
GGGTGTCTCG GCGGCGATCC GGACCGGCTG GTGATCATCG GCGTGCTCGG TAACGGCGCG
CATCCGCCGG CGACGTTCAG CCACGCGGGC GGGCTGCCGG GCAATCGCTA CCTGTCGGGC
ATCAAGACGA AGGAGATTCG TGGGCAACGG TACAACCAGC TGCGTCTCGA CGACACGCCG
AACCAGATCA GCGCGCAACT GGCGAGCGAG CACGCGCATT CGCAGCTCAA TCTCGGATAT
CTGACGCAAC CGCGCGAGAA CGGCCACGGG AACGACCGCG GCGAGGGCGT GGAGTTGCGT
ACCGACGCGG CGGCGGCGCT GCGGGCGGCG CAAGGCATGC TGCTGACGAC CTACGCGCGC
ACGCAGGCGA GCGGCGGGCA ACTGGACCGT GACGAGCTGA TTCGGTTGCT CGGCGAATGC
GCGGAGCTGT TCAAGGCGCT GGGCGACTAC GCGGGGCAGC ACGGCGGGCA GGCCGCGGAT
ACGGCCGGCC AGCACGCGGT GGCCGCCGCG TTCAAGCGCT GGGCGCCGGG CACGGGCACG
GACGGCGCCG ATGCGCCGTC CGACGGCGCA GCGCGCGCGC TGATGGCGTT CGGCGCGCAG
GCCGGTTCGG TGAACGTCAC GCCGAAGACG CATGTGACGT ATGCCGGCGA GAACATCGAT
CAGGTCGCGC AGCAGCACCT GCAACTGATG AGCGGCCAGC GGCTGAACGC GACGGCCGGG
CAGGGCATGC AGCTCTTCGC GCGGGGCGCG GGGGTGCAGG CCGTGGCGGG CGAAGGGCCG
ATGCTGCTGC AGGCGCAAGC CGGCACGCTG ACGGCGAACG CGCAGAAGGG CGTCAAGATC
ACGACGAACG AGCACGAGGT GTTCGTGAGC GCGCCGAAGA TTCGGCTCGT TGCCGAGGAC
GGCAGCTACC TCGAGCTCGG CGGCGGCATC ACGCTCGGCA CGAACGGCGA CATCAAGCTG
CTGTCGGCGT CGCACCAGTG GGGCGGGCCG TCGACCGCGC AGGCGGCGAA GAGCGGGTTC
GGCAATCAGC CGACGGATCA GCGTTTCAAG CTGCACTATC CGGGCGAGGA CGGCGATTTG
CAGGCGGCGG CGAACAAGCG GTTCCGGATC ACGCTGGACG ACGGGCGCGT CATCGAAGGC
AAGTCCGACG CGAGCGGCCT GACGGATCTG GTCAAGGACG ACGCGATGCG TATCGCGAAG
ATCGACTATC TGAAACCGAA GCTCTGA
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| Protein sequence | MTNLNDTLRN FASGAVDWNK RPVALHFGAA QAALGHLLAL QHASVQEGLM TGIHGRLTCV
STRRDLPPGV LLGIPVSIRL ITDRGQPHTV NAIISDVQIG QSDGELCVYQ LTVCDALSLM
DKRTNSRVFR KRSVIEVLAT LFNEWQQRSP ALARAFEFDL SGLRADRYPP RELTRQVNES
DAHFVRRLLR REGITVFAKA GPAKGERPLQ GDAPVHTLVC CDDPMSLPQA PAGTVRLHPR
DGGAAQRDTV TLFALRRQLA PGKAGRPSWD YKKARIDESS VASSLDQGEA GNDLAKLLTD
IAIDIAHAGD SWRDHERLTR ARMLAHEFEA ERHDGVSSVR DLAVGAWITL TGDPDWDRQL
ADKRQFVITS IDHDIWNNLP KGLNERVHAL FAASRNLACA PRALPSALAN DADTRYENTF
TCVRRGVPLA PAYDPQADLP PAHLLTGTIV GAEGEEVFCD EDGRVRVRLH GLDPADHAHA
QGAGTNGNAG DSAPIRVASS LAGAYFGASF LPRVGMEVLL GCLGGDPDRL VIIGVLGNGA
HPPATFSHAG GLPGNRYLSG IKTKEIRGQR YNQLRLDDTP NQISAQLASE HAHSQLNLGY
LTQPRENGHG NDRGEGVELR TDAAAALRAA QGMLLTTYAR TQASGGQLDR DELIRLLGEC
AELFKALGDY AGQHGGQAAD TAGQHAVAAA FKRWAPGTGT DGADAPSDGA ARALMAFGAQ
AGSVNVTPKT HVTYAGENID QVAQQHLQLM SGQRLNATAG QGMQLFARGA GVQAVAGEGP
MLLQAQAGTL TANAQKGVKI TTNEHEVFVS APKIRLVAED GSYLELGGGI TLGTNGDIKL
LSASHQWGGP STAQAAKSGF GNQPTDQRFK LHYPGEDGDL QAAANKRFRI TLDDGRVIEG
KSDASGLTDL VKDDAMRIAK IDYLKPKL
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