| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A1181 |
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| Symbol | rafA |
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| ID | 3693620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | - |
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| Start bp | 1481558 |
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| End bp | 1483729 |
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| Gene Length | 2172 bp |
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| Protein Length | 723 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637731435 |
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| Product | alpha-galactosidase |
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| Protein accession | YP_336338 |
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| Protein GI | 76819025 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3345] Alpha-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.207632 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGACA CAAAACTTAT TCGATTGACT GGTTCAAATC TCAGCATCGC ACTAGAGAAA
TCGGCCGATA TGCCGCCTGT ATGGCGCTAT TTTGGCGCAA AATTAGAACC GCACGCCATC
GCCTGGAGCG CAGACGACGT GCGACCGCAC CCTCCGACGT TACTCGACGG CGATCCGCCC
TTCACGGCAT TCTCGACACA CGGATTCGGC TGGTTCCATC AACCGGCACT CGTCGGCAGC
CGGCCTGGAG ACGTTGGCGA TATTGACTGG GCACAGAGCT TTCGCCTTGA TGAGGTAAGC
ACAAACGATC ACTCGGTAAC AATGAAGTTG AGCGACGAAC AGGCCGAGTT GGGTGCAATC
CTTAGTTACA CAATCGATCC TGCGTCGGAC GTCATAACGA TGTGGGCTGA ATTAGAGAAC
CGCGGCGCGA CTCCATTCCG TGTAGATTGG CTAGCCGCCG CCACTGTACC GCTGCCGCCC
GACGCAAATC GGGCACTGAG CTTCTCGGGG CGCTGGACGC TGGAGTTCCA GGAAAATCGT
GAAATTCTCG GTTCTGCGAC GTGGAGGCGC GACAACCGAC GCGGGCGCAC TTCTCACGAC
TCGTTTCCGG GAGTCATGGT CGGCTCATCG CTAGCGGACA ATGTGGGCAC CGTATACGGC
GCGCATTTGG GATGGAGTGG AAACCACACC ATCATCATCG AACCGATGAC CGATGGTCGC
CGGCAACTGC AATTGGGGGA ATGGTTGGCA CCGGGCGAAG TCGTGCTTGC ACCGGACCAA
CGCTATCGCA CACCATGCGC CTTTCTTTCA TACAGCGAGC AGGGCCTGAA TGGCTTGAGC
GCGCAGTTCC ACCGCTTCGT TCGGGCGAAG GTACTGCGCT GGCCACGGCA ACGCATGCAA
CCTCGGCCGG TGATCCTCAA TACTTGGGAA GCCGTATATT GCGATCACGA TCTCGAGGAT
CTCAAGGAAC TGGCGACTGC GGGGGCGCAG ATCGGCATCG AACGTTTCGT TCTCGACGAC
GGCTGGTTCC ATTGCCGCGA CAACGATCGC GCCGGACTAG GCGACTGGTG GCCCGATGCG
AACAAGTACT CTCGCGGGCT CACACCACTC ATCCATCACG TTCGAGATTT GGACATGGAC
TTTGGCCTAT GGATCGAACC CGAAATGGTC AATCCGGACA GCGAATTGTA CCGCGCCCGC
CCGGAGTGGA CGCTTCGGCT CGACGGTCGG CCACTCGTGA CAGGTCGCAA TCAGCTCGTA
CTGGACCTCG CGGAACCAGA TGTGCGCGAA TATCTCTTCA CGCAAATCAG TGCTTTATTG
CGCGACAATG CGATTTCCTA TCTCAAATGG GATATGAACC GAGATCTCGC CACGGCTGGC
CATCGTGGCA TGCCCGCTTA CAGGCGTCAG ACCCAGGCGT TTTATGCGTT GCTCGATCGG
TTGCGCGCCG CGTTTCCTGC TGTGGAGATC GAGAGTTGCG CCTCCGGGGG CGGACGAGCC
GATTACGGTG TGTTGGCTCG CATGCACCGT CTCTGGACGA GCGACTGCAA TGACGCGCTC
ACGCGCATCG GAATTCAGCG CGGCTTTCTG CGTTTCTTTC CTCCCGAGCT CATGGGTGCA
CATATCGGGG CCGATCGTTC CCACACGACC GGACGCCGGC ACACTCTTGC TTTCAGAGCC
GCAGTCGCAC TTTTCGGTCA CCTTGGCGTT GAAGTCGACC CGAGAGCAAT GCCCGCCGAC
GAGATCGAAG CCCTCATGCG CTGGATTGCA ATATACAAGG AATGGCGGCC CGTTCTACAT
GCGGGAACCC TTCACCAGGG GTGTATCAGC GAGGCGCTCT CTTGGACTCA AGCTGTCTCC
GATGACGGAA GTGCGTCGCT TTTGGCGATC TATCGACTAC GCGAGGACAA CGCGCGATAC
GCCACACCAC TCAAGATCAA GGGACTGAGA TGCGACATCG CCTATCGAGT ACAAACGCTC
TACGCACCTG TCGCACCACA TTTCGTGAAG CAAACGCAAA TGTTCAAGAT GATGCAGAAC
GAAGGCGTGG TGATTTCGGG CGCAAGTTTG CTGGAGTTAG GGATGCCAAT TCCTCCCATG
CCGCCCGAAT CCGCCGTTGT GATTTCGCTA AAACCCGCCT CGGAGTTATC CAAACCGCTT
GATCTGTATT AA
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| Protein sequence | MFDTKLIRLT GSNLSIALEK SADMPPVWRY FGAKLEPHAI AWSADDVRPH PPTLLDGDPP
FTAFSTHGFG WFHQPALVGS RPGDVGDIDW AQSFRLDEVS TNDHSVTMKL SDEQAELGAI
LSYTIDPASD VITMWAELEN RGATPFRVDW LAAATVPLPP DANRALSFSG RWTLEFQENR
EILGSATWRR DNRRGRTSHD SFPGVMVGSS LADNVGTVYG AHLGWSGNHT IIIEPMTDGR
RQLQLGEWLA PGEVVLAPDQ RYRTPCAFLS YSEQGLNGLS AQFHRFVRAK VLRWPRQRMQ
PRPVILNTWE AVYCDHDLED LKELATAGAQ IGIERFVLDD GWFHCRDNDR AGLGDWWPDA
NKYSRGLTPL IHHVRDLDMD FGLWIEPEMV NPDSELYRAR PEWTLRLDGR PLVTGRNQLV
LDLAEPDVRE YLFTQISALL RDNAISYLKW DMNRDLATAG HRGMPAYRRQ TQAFYALLDR
LRAAFPAVEI ESCASGGGRA DYGVLARMHR LWTSDCNDAL TRIGIQRGFL RFFPPELMGA
HIGADRSHTT GRRHTLAFRA AVALFGHLGV EVDPRAMPAD EIEALMRWIA IYKEWRPVLH
AGTLHQGCIS EALSWTQAVS DDGSASLLAI YRLREDNARY ATPLKIKGLR CDIAYRVQTL
YAPVAPHFVK QTQMFKMMQN EGVVISGASL LELGMPIPPM PPESAVVISL KPASELSKPL
DLY
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