| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A3095 |
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| Symbol | |
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| ID | 4903311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | - |
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| Start bp | 3005952 |
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| End bp | 3007127 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640146198 |
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| Product | putative outer membrane porin |
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| Protein accession | YP_001077124 |
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| Protein GI | 126458086 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCCGG GCCATTTCCC CGACATGGGA GACATGATGG GAGACATGAT GAACGCGAAA
TCGATCGCGG CGGCGGCGCT CGCCGTTGCG CAGGCGGGCC TCGCCCACGC ACAATCGTCG
GTCACGCTGT ACGGCGCGCT CGATGCGGGC GTTCTGTGGC AGAACACGTC CGCCGCGTCG
TTCAGCCCGA CGGCGCCGAA TACGGGCGCC GTCGTGCGCT TCAAGGACGG CGGCGTCTAT
TCGAGCCTCT GGGGCATCAA GGGAACGGAG GATCTCGGCG GCGGCTACCG CGTGAATTTT
CGGCTGCAAG GCGCGTTCGA CGGCGGCACC GGCAAGTTCG GGCTGAGCGA CGCGCCCGGT
GCGGTCGCCG CGTTCAATCA GATCGCGACG CTCGGCGTGT CCGGGCCGTT CGGCACGTTC
AACGCGGGCC GGCAGATCGT ACCGATGATC TACGCGATGG CCGACACCGA CGTGCGCGCG
GCGCGCTTCT TCGGCAGCGT GCTGACCGCT TGGCTCGGCC TGAATACCGC GGCCGGCTGG
CCGGGCAACA GCACGAACGC GCCGATCGGC GCGCTCTACG ACAGCGATGC GCTCGTCTAC
CAGTCGCCCG CGTTCGGCGG CGCGTCGCTC GCGCTCGAGT ACGCGCCGGG CGGTGTGCCC
GGCGGCGTGC AGCGCGGCGC GCGCGCGTCG ATCGTGCTCA AGTACGCGTC GAACGCGCTC
AACCTGGCCG CCGTCTATTA CAACGGTCAC GACACGAATC CGGCGCCGGG CGCGAGCGCG
ACGGGACTCG ACAACAACCG CTTCGTCTAC GTCGGCGCGC AGTACAAGCT GAAGGATGTC
GCGGTGTCGG CGTCGTACGG CAACGGCCGG AATCCCGCGC GCGGCGATCG CGTGAACCTC
GACATGTTCG CGTTCGGGCT CGGCTACCGC GTGTCGCCGT TCTTTCGCGT GAGCTCGGGC
GTCTACTACC TGAAGGACCG GAACCGTTCG GCGAACCGGT CGACGTCGAT CGTGCTCGGC
GCCGATTACG AGCTGTCCAA GCACACCACG CTATATGCGC AGGGGGGGCG CGTCGACAAT
CGCGGCACGA TGGCTCAGAT GCTGGCGTAC GGGCAGCCGG TCGCGCCGGG GCTCGCGACG
ACCGCCGCGA TGCTAGGGAT GCGTCATTCG TTCTAG
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| Protein sequence | MLPGHFPDMG DMMGDMMNAK SIAAAALAVA QAGLAHAQSS VTLYGALDAG VLWQNTSAAS
FSPTAPNTGA VVRFKDGGVY SSLWGIKGTE DLGGGYRVNF RLQGAFDGGT GKFGLSDAPG
AVAAFNQIAT LGVSGPFGTF NAGRQIVPMI YAMADTDVRA ARFFGSVLTA WLGLNTAAGW
PGNSTNAPIG ALYDSDALVY QSPAFGGASL ALEYAPGGVP GGVQRGARAS IVLKYASNAL
NLAAVYYNGH DTNPAPGASA TGLDNNRFVY VGAQYKLKDV AVSASYGNGR NPARGDRVNL
DMFAFGLGYR VSPFFRVSSG VYYLKDRNRS ANRSTSIVLG ADYELSKHTT LYAQGGRVDN
RGTMAQMLAY GQPVAPGLAT TAAMLGMRHS F
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