| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I0520 |
|---|
| Symbol | |
|---|
| ID | 3848409 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | - |
|---|
| Start bp | 587724 |
|---|
| End bp | 588992 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637840193 |
|---|
| Product | polysaccharide biosynthesis family protein |
|---|
| Protein accession | YP_441077 |
|---|
| Protein GI | 83721089 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.203953 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGACCG TCCGCAAGAA CTTCCTGCTG CTGATGACGC TGCAGATCTC GACCTATGTC
GTGCCGCTCG TCACGCTGCC GCTCCTCACG CGCGTGCTCG GTCCCGAAGC GTACGGTCAG
CTGTCGTTCG TGCTCGCCGT CATCACGTAC TTCATCAATT TCACGAACTA CAGCTTCGAT
CTGACCGCGA CGCCGCGCGT CGCGCTCGCG CACGACGATC TCGCCGCGCG CTCGCGGATC
TTCTGGGCGA CCTTCGCCGC GCAGGCCGCG ATCACGGTGG CCGGCTTCGC GATCCTGCTC
GCGCTCACGT TCGCGATCGA CCGGTTCGCG ATCGACCGCA CGCTGCTCGT GATCGGCTTC
GGCATGACGG TGGGCGCCGC GCTCACGCCC GGCTGGTATT TCCAGGGCAT CCAGAAGCTG
CGCATCTACA GCATGACGCT GTTCGCGTGC CGCGCGCTCA GCGTGCCGGC GATGTACCTG
TTCGTGCGCT CGCCCGCCGA CCTGATCGAC GCGGTCGCGA TCAACGCGGC CGTGCCGCTC
GTGTGCGGCG TGCTCGTGTT CGGCTATCTG ATCGTGCGGC GCGAAGTGGC GTTCGTGCGC
ATCGGCGCGG CCGATGTCGC CTCATCGCTC AAGGGCGGCT GGCAAGTGTT TCTCGCATCG
ACTTCGGTTG CGTTCTACGC GTCGACGAAC ACCGTGCTGC TCGGCTTCGT GTCGGGCAAC
GTGGCGGCGG GCTACTTCGC CGCGGGCGAC AAGCTGATCC GCTCGGCCAT CAGCCTGCTG
CAGCCGCTGA AGGCGGCCGC GTATCCGCAC GTCAGCTATC TGATGCATCA CGCGCGCGAG
GACGCGATGT CGTTTCTGCG CAAGCTGCTC GTCGTGCAGG GCGCAATGGT GCTCACGATC
TCGCTGGCAA TTTTCGCGCT GGCGCCGCTC GCCGTGCACA TTCTGTACGG CCCGACCTAT
GAGCCGACGG TCGGCGTGCT GCGCTGCATG GCGTTCATTC CGTTCATGGC CGGCATGACC
GATCTGTTCG GCGTGCAGAC GATGCTGCCG CTCGGCATGA AGAGCGCATT CAGCCGCGTG
CTGATTTCGT CCGGCGTGCT GAACGTCGCG CTGCTGCCGC TGCTCGCGAA GTTCTTCGCC
GAGCAGGGCG CGGCCGCCGC CGTGCTGATC GCGGAGACCG CGGTCGCCGC GACGCTCGCG
TACGTGCTGT ATCGCAAGCG CGTGTCGATC TTCGCGCGGC CGGCGGCGCG CCCCGCTCCG
CGCGGATAG
|
|---|
| Protein sequence | MTTVRKNFLL LMTLQISTYV VPLVTLPLLT RVLGPEAYGQ LSFVLAVITY FINFTNYSFD
LTATPRVALA HDDLAARSRI FWATFAAQAA ITVAGFAILL ALTFAIDRFA IDRTLLVIGF
GMTVGAALTP GWYFQGIQKL RIYSMTLFAC RALSVPAMYL FVRSPADLID AVAINAAVPL
VCGVLVFGYL IVRREVAFVR IGAADVASSL KGGWQVFLAS TSVAFYASTN TVLLGFVSGN
VAAGYFAAGD KLIRSAISLL QPLKAAAYPH VSYLMHHARE DAMSFLRKLL VVQGAMVLTI
SLAIFALAPL AVHILYGPTY EPTVGVLRCM AFIPFMAGMT DLFGVQTMLP LGMKSAFSRV
LISSGVLNVA LLPLLAKFFA EQGAAAAVLI AETAVAATLA YVLYRKRVSI FARPAARPAP
RG
|
|---|
| |