| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1439 |
|---|
| Symbol | yidC2 |
|---|
| ID | 6364019 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | + |
|---|
| Start bp | 1668587 |
|---|
| End bp | 1669594 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642680625 |
|---|
| Product | preprotein translocase subunit |
|---|
| Protein accession | YP_001955382 |
|---|
| Protein GI | 189440301 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0706] Preprotein translocase subunit YidC |
|---|
| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTCAA ATGAATTTCT GCTTGATAGC GGGTTTTGGG GATTTCTATA TAAAATCCTG
ACTCCCGTTG AGTGGTTGCA GACCTGGATC ATGAAGATCG TGCATGACTT CTTCGTGATG
CTGGGCGTGA GCCCGATTGG TGTCTCATGG GTGCTTGCCA TTATCATCCT GGTGCTGGTG
GTGCAGGCTT GTATCTTCCC GCTGTTCTAC AAGCAGATGA AGTCGATGCG CAAGATGCAG
GCATTGGCGC CGAAGATGCA GCGTATTCAG AACAAGTACA AAGGCAAGAC GGATCAGGCT
TCCAGGGAGG CCATGAGCCG TGAAACCATG AAACTGTATC AAGACAATGA CGTCAATCCG
GCTGGCTCCT GCTTGCCTAT GCTCATTCAG GGCCCGGTGT TCATGTCCAT GTTCTATACG
CTGTCGGCCA TTCCATACAT TGCCAACGGT AAACGCGATG CGTTGGGCGC GTTCGACGTA
GCAACCGCCA AGCAATTCAC CCAAACCGAT GTGTTCGGCA TTGTCAGCGT GACCGATAAC
TTCACCAGTG CTGCCGCTAG TGGCAAGGCG GTCATCGGTA TCTTCGTGTT CCTGATGTGT
TTCTGCCTGT GGTTTATGCA GTACTTCAGC ATGAAGCGCA ACATGGCAGC TGCTTCGATG
AACAAGCAGA CCGAGACCAT GCAGAAGGCT ATGCTGTGGC TCTTCCCGGT GATGTACATC
TTCTCCGGTG TCGCCATGCC GTTCGCCGTG CTGGTCTACT GGCTGACCAA CAACGTGTGC
AACCTCTGCC GCACATTGTG GCAGGTGTAC GCATTCCCGA CCCCTGGCTC TCCGGCTGCG
GCGGACAAGG AGAAGCGCGA TCATCGTAAT GAGAATGCTC GCCGCGCAAA GGCCGGCCTG
CCCTCTCTGG AAGAAGAAGC ATTGGCCAAA GCCAAGGAAG AGGCCGAGCG TAAGGCCACT
CAGGGCTATC AGCGTCAACA GCCCGTGCGT AAGCGCAAAA AGAAGTGA
|
|---|
| Protein sequence | MNSNEFLLDS GFWGFLYKIL TPVEWLQTWI MKIVHDFFVM LGVSPIGVSW VLAIIILVLV
VQACIFPLFY KQMKSMRKMQ ALAPKMQRIQ NKYKGKTDQA SREAMSRETM KLYQDNDVNP
AGSCLPMLIQ GPVFMSMFYT LSAIPYIANG KRDALGAFDV ATAKQFTQTD VFGIVSVTDN
FTSAAASGKA VIGIFVFLMC FCLWFMQYFS MKRNMAAASM NKQTETMQKA MLWLFPVMYI
FSGVAMPFAV LVYWLTNNVC NLCRTLWQVY AFPTPGSPAA ADKEKRDHRN ENARRAKAGL
PSLEEEALAK AKEEAERKAT QGYQRQQPVR KRKKK
|
|---|
| |