Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_0955 |
Symbol | uvrD4 |
ID | 6363798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | - |
Start bp | 1104145 |
End bp | 1108431 |
Gene Length | 4287 bp |
Protein Length | 1428 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642680123 |
Product | superfamily I DNA and RNA helicase |
Protein accession | YP_001954899 |
Protein GI | 189439818 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTGGACG GCATCGACCG TGATGGAGCG GCGAGGCTGA TTGTCGGCAC GCCTGGAAGC GGCAAAACTG AATTCGCCTT ATCGGTGTTG ATGGCGGGGC TGCGCCGCTA CGGTGGCACG CAGGCGGTGA TGGCCGTATC CGGCCGTGTG GCCGCCGACG CATTGGGCAA TCGGGTGATT CGTGAGCTCG GGTTTTCCGT GCAGGCCAGG CCGGTCACCA CGCTGGGTGC CGTGGCATTC CGGGCCATAT CGGCTTCGCG CGAGGGAACT GGATTGCCGT CGCCTCGATT GCTGAACGGT GCGGAACAGG ATGCTTTGCT GCGTCAAGTC ATGGCCGTGC ATCTGCGCCA TGCCGTAGCG GGAGATGATT GCGGCACCTG TGATTTGCTG CGCGTCTACT TTGCCCAGGA TGACTGGGCG AGACTCATAC GCGATGCCGG TGCCGGCGAG ATGCCCGGCT CGGCCGCTTC CGCACAATCA AGCCTCTCGC AACAAGGGTC GGATTCGCCG TCTCCGACGT CGGCAGGCGG CTCGACCAGC GCGGATAGGT TCACGCGAGG TATTTCAGAT GCGTTTATCA GCCAGTTGCG CGATATGCTG GCCCGATTGG ATGAGCTCGG TGTAGGCGTT CACGAAGAGC CACGTCTCTT GGACGCCGTG ACGGAGGACG CGCGATTGTC GGTGCAATGG CGTTTGGCTT TCGCGTTGCG CCGTGAATAT ATTGCAGCCC AAAGCGCGGT ATATCCGGGG CAATACCGTT TGGATGCCTC GTATTTGCTG GTGGCAGGCG CTCGTGTGGT GCGTGAGGCA TTCGCCGCCG ATCACGCGGA TGATTCCGAC CGGCCTATGT GTGTGGAGGC GTTGGGCTTG CCCCGGCTGC TGGTTGTGGA TGATGTTCAA GACACCACGC TGGCCGGCAT GCGCTTCTTG GAGGAGTTGG GGAATGCCGG CGTCAAGTTG GTGCTGGTCG GCAACCCGGA TGAATCGGTG CAGACCTTCC GCGGATCGTA TCCGGAATAT CTGATGCGCC GTGCCGTGGA AGGGCGGCTG AAGGCCAAGG AAGAACAGCT GGTTGGCGGC AGTGCCGTCG CTGATCAGTC GCACATGACG ATGGCTGATG TGATCGCGTC TCGTATTTCG CTGTCGATTC CCTCGCCGGA AGACGAGCCG CTGCCTCCGG CCGAGCGTCC CGGCAAGCTG ACCGCCATAC TGGGCGGAGT CGATGCAGCG AATTATCAGG CGGACGGCAC GGTGACCGCC GGCCTGTACC GATCCTCACG TGAGGAGCTG GATGATGTGG TCTGGCGCAT CAAGCGGGCG CATCTTGACC GGCATATTCG GTGGAACGAC ATGGCGGTCA TCACCCACGA CAATGCCGCC GTGCGGCTGT TCGGCGAACG ACTGCGCCGA GATGGTGTAC CGGTGCGGTA TTCGTCGGTC ACCCGTCCTT TGAAGGACGA GACTTTCGTG CAGGGATTGT TCGCGCTTGT GGAGCTTGCC CGATTGCGTG CCGAGGGGAT GGCGGAATGC CAGATGACGT TGGCTTCCTG CGCGGCATAT ATAAGGACTA GAGTGGCCAC GTTGATGAAC GGCCCGTTGG TGAGTGCCGG GGCCAAACCC GGTCAGGGGC GTCCCGCAAG GCTTGCGCCG ATCGAATCGG CCATGGGGTC GTTGGAGTCG CTGGCGCATC TCGCCACGGA TGATGCCATG CTGACCTCTC TGACGACGGC ATGGGAAACA TTGCGTGAAA CATACCATGA AACACGGCGT GAAACAGGTC GTGAAACATC CTCGTCAGTG GTTTCGACGT CAGCGGTTTC GTCGTCAGTG ACTTCGTTGC CAGTGTCTGT CGAAATACTC GGTGAACCGT CCGGCGATGA CTTGGCCTTT GGCGTTGACG CGCTGTACGT GATGCTTGCC ATTGATGATG CCGCCGCGCC GGCGCAGGCT GCGCTCGCAT CCATCCACGC GGTGCTCGGC AACGACCCTC AGGCCCGCGC TTTTGCGAAC CTGTGGCATC TGGTGGGCAG CGTTGCTTCC GGCTTGGAGC GGCTGCCGGC AAGCCAGCGC GTACAGCCGC GCTATGCGCT GTCTGTTGCG TGGAACGCCA CCGGTCTGGC ACCGGTCTGG CAGCGTGCGG CATTATTCAA CACGGCAGAG GGGCGTACGG CCAATGACCG GCTGGACGCG GCAATGCGCC TGTTCCAGTT CGCCGATGAT TCCACCGCCA GTCGAGACAT CACGTCATTC ATGGCACAGG TTCGGGGCAT GGAAGTGCAG GCCGATTCCT TGGCCCACAT AGGACCGGTG GAAGACGCGG TGACATTGAC TACGCCGGCA GGCGCGGCCG GACGCCACTG GGAATATGCG TGGATACCGG TGGTCCAGCA AGACGTGTGG CCGAACCTCG CCGGGCGCAA CACCATGTTC GGTGGTGAAG ACCTTGCCGA GCTCGTGCTG AGGGGAGCGC TTGAAGAAAG CGACAAAACC GGGCATGATC CGCGGTTCGC GGCTGTATTG TCGGGCGAGA AGAAGAGTTT CCTGGTCGCG CTGACCCGTG CACGGCGAAT CATGATCAGC GCGGTATGGA ACGACAGCAT GAGCCCCTCG GACTTTCTCT TCGGGTATCT GCCGGAATAC TATCCGCGCA ACCGGCAACA GGCGCCTTTC ACCACAGTGG GGGCACATGC GGGATTCGCC GAATATGATC TGGCCGGATT GGACGCCGAC CCACGTGGGT TGGTCAGCGC CGCCCGCGCG GTTCTGGCCA CTGCTCAACC GCAGCAGGCT GCCGCAAAGG ACGCCGCGAT TGCGTTGACA CTCCTGTTAG AGCATGGTGT GCGCGCCGCA AATCCGCAGA GCTGGGCGTT TGTGGAATCG CCGGCCCAAT CGGATAGCGC GTCATCTGGC GGTGCGTCAT CTGGCGGTGC GTCATCTGGC GATACCTCAT CTGACAGTGC CTCATCCGAC AGCGCGTCAT CTGGTGGTGT ACAGCCTGAC GGTATCCAAA CAGGGAAAGG CAAGACGGAT GCGCAGGCCG CGCCCATGGT CACCTTATCT CCATCGGCGG TCGACAGCCT ATGGGCGTGC CCGGTGTGCT GGATGCTGGA GAACCGGTTC GCCGGTCCTC GCCCCAGCTC CGTGGCCACC AGTTTCGGAA CCCTCATCCA TGCGGTTGCG CAGCAAGGCA GCGAGGAAGG GCTGGACCAT CTTTCCCACA ATGCCCAGGC GTTGGCCGCA CTGGGCTTGG ACTCCACGGC CGGCACGGAA CGTCGCATCG AGGCTGTCTC GGCACGGCTT AATGCCATCT ATCAGAGCAA ACGTCCTGAT CCGAATGCCA TAGCCGACAC CCGGAACCGC TATGAGGCCA CCCGTAAGGA CGAGTCCGCG GCGGATACCC TGCGCAACAT CGCCGATTAC TTTGTGCGCA GCGACGCCGA TCCGGAAACG TATCTTGGCA AGAACTCCAG CAACTTCAGC ATTGGCGCAT TGGCCGGTGC CGAATGCGAA CGGGAGTTTG CCGCACGATT CGATGTGCGT GACATACTCG ACGCATACAA TGCCGTGCCC GGCCTGCACC CAATCGGTCG GAACACGCTG GTCCGTCTGA TGGGAGCACT GGTCGGAGGG TGGCCGGAAG GCATGGACGA GCATCTGACC GTGAGACTGT CCGGGCGCAT CGACCGTATG GAAACCCGCG TACTCGCAGA CGGCGGCGAA TGCATTCGCC TCATTGACTA CAAAACAGGC AGAACGCCCA CGGTCAAACA GATTTTCAAT GATTTGCAGC TCGTGTGCTA TCAGCTTGGC CTCGTGTTCC CCGAAGACGG GCCGCGCGGT GCCAAGGCAC TTGCCGCAAT GCCGCATATC AGCCAAAGCG TGCTATTCCA TGTCGGGCAG AATGCGGCAC CAGCCAGAAG CTACGCTCCG GAAGGTGCCT TCCAGCCGCC GCTGTTCACT GATGGCTCGT TGAATGCCGA ACCGTTCACG CCCCGATACT GGTATAAAGA CCCCAACCGT TTCTTCGACA TACCCGCCAT AGATCCGGCT ACTCCTCCCG AAGGTGTGAG TGCCGAAGCG TGGGCGCAAT TCGCCGCGCT CGCCGGTACG CAGACGTTAT GGTCGCTGAC CATGATCGCC CGCGTATTCT ATGCCGCGGC GGCCAGCAGA TCAGCCATCA TCGAGGCCCA TCCGCAAGAC ACCCATATCG GATTCTGCCG TATGAAGAAC GTCTGCCCTG CCTGTGCAGG CCAGATCGAC ACGATTTTCG AAACGAGGCA AGCATGA
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Protein sequence | MLDGIDRDGA ARLIVGTPGS GKTEFALSVL MAGLRRYGGT QAVMAVSGRV AADALGNRVI RELGFSVQAR PVTTLGAVAF RAISASREGT GLPSPRLLNG AEQDALLRQV MAVHLRHAVA GDDCGTCDLL RVYFAQDDWA RLIRDAGAGE MPGSAASAQS SLSQQGSDSP SPTSAGGSTS ADRFTRGISD AFISQLRDML ARLDELGVGV HEEPRLLDAV TEDARLSVQW RLAFALRREY IAAQSAVYPG QYRLDASYLL VAGARVVREA FAADHADDSD RPMCVEALGL PRLLVVDDVQ DTTLAGMRFL EELGNAGVKL VLVGNPDESV QTFRGSYPEY LMRRAVEGRL KAKEEQLVGG SAVADQSHMT MADVIASRIS LSIPSPEDEP LPPAERPGKL TAILGGVDAA NYQADGTVTA GLYRSSREEL DDVVWRIKRA HLDRHIRWND MAVITHDNAA VRLFGERLRR DGVPVRYSSV TRPLKDETFV QGLFALVELA RLRAEGMAEC QMTLASCAAY IRTRVATLMN GPLVSAGAKP GQGRPARLAP IESAMGSLES LAHLATDDAM LTSLTTAWET LRETYHETRR ETGRETSSSV VSTSAVSSSV TSLPVSVEIL GEPSGDDLAF GVDALYVMLA IDDAAAPAQA ALASIHAVLG NDPQARAFAN LWHLVGSVAS GLERLPASQR VQPRYALSVA WNATGLAPVW QRAALFNTAE GRTANDRLDA AMRLFQFADD STASRDITSF MAQVRGMEVQ ADSLAHIGPV EDAVTLTTPA GAAGRHWEYA WIPVVQQDVW PNLAGRNTMF GGEDLAELVL RGALEESDKT GHDPRFAAVL SGEKKSFLVA LTRARRIMIS AVWNDSMSPS DFLFGYLPEY YPRNRQQAPF TTVGAHAGFA EYDLAGLDAD PRGLVSAARA VLATAQPQQA AAKDAAIALT LLLEHGVRAA NPQSWAFVES PAQSDSASSG GASSGGASSG DTSSDSASSD SASSGGVQPD GIQTGKGKTD AQAAPMVTLS PSAVDSLWAC PVCWMLENRF AGPRPSSVAT SFGTLIHAVA QQGSEEGLDH LSHNAQALAA LGLDSTAGTE RRIEAVSARL NAIYQSKRPD PNAIADTRNR YEATRKDESA ADTLRNIADY FVRSDADPET YLGKNSSNFS IGALAGAECE REFAARFDVR DILDAYNAVP GLHPIGRNTL VRLMGALVGG WPEGMDEHLT VRLSGRIDRM ETRVLADGGE CIRLIDYKTG RTPTVKQIFN DLQLVCYQLG LVFPEDGPRG AKALAAMPHI SQSVLFHVGQ NAAPARSYAP EGAFQPPLFT DGSLNAEPFT PRYWYKDPNR FFDIPAIDPA TPPEGVSAEA WAQFAALAGT QTLWSLTMIA RVFYAAAASR SAIIEAHPQD THIGFCRMKN VCPACAGQID TIFETRQA
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