| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0898 |
|---|
| Symbol | citT |
|---|
| ID | 6362881 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | - |
|---|
| Start bp | 1030526 |
|---|
| End bp | 1031713 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642680066 |
|---|
| Product | putative di-/tri-carboxylate transporter |
|---|
| Protein accession | YP_001954842 |
|---|
| Protein GI | 189439761 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.878085 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGACGCT GGCTGATCAA TGTAGCCAAA AATGAGACGA TTCTCATCGT CGCCGCAATA
CTCGCCCTGA TTTCGTGTTT CATTGTGCCG CCGGACGCCG ATTACAAAAG CTACATTCAC
GCCAGCACCA TCAGCCAGCT CATCTGCCTG ATGATTGTGG TGTGCGGATT CCAGCGTATC
GGCGTGTTCC GCATCATCGG TTCGCGATTG CTGGAGAAGG TCAGCACCAT GCGCGGACTG
GTCATTACGC TTGTCGCTTT GACGTTCTTT TCCGCGATGT TCATCACCAA TGACGTTGCG
CTGGTCACGT TTGTGCCGTT CGCGGTGGCC GTGCTCATCA TGGCTGGGCA AGAGGATAAG
ACCATCCTCG TGGTCACGCT GATGACCATT GGCGCGAACG TGGGCAGTAT GCTCACCCCG
ATCGGCAACG CGCACAACCT GTATCTCAAA GCCCTGACCG GCATGCCGAC CATGGAATTC
CTCGGCATCA TGGCACCGTA TTCCGGCACG GCGGCCGTGT TGCTGGTCAT CGTGATTTCC
GTGGTGTTTG GCGGCAAACC GGTCGGCGAC CTGGGCGACC TCGAAACCGG CGTGCTGGCT
CCCGAGCGCA ACAAACACCA GCCCGACGAG ATTCGTATCA CCGGCTACGG CGCCGGTTAT
GGCGGCTGGC GCACCATCGT CTACTCGCTG CTGTTCATCG TCTGCCTACT GGCCGTCTCC
GACGTGATTC CCCTGTGGGT GATGTGCGTG ATCGTGGTCG TCGTGTTCCT GTTCACCGAT
CGGCGCGTAT TCAAATACGT GGATTGGGGA CTGCCGCTCA CCTTCTGCAT GTTCTTCATC
TTCATCGGCA ACATGAAGCG CGTGCCCGAA TTCTACGAAC TGGCGCGCTC GCTGGTCGGC
GGCCATCCGC TGGAGGTGGC GGTCGGCTCC AGCCAGGTCA TCAGCAATGT GCCCACCACG
ATTCTGCTTT CCGGCTTCTG CGACCAATGG CGCGATCTGA TCATTGGCAC CAATTTGGGC
GGCATGGGTA CGCTCATCGC CTCGATGGCC TCGCTTATTT CTTACAAGAA CGTCGTGCGC
CAATACCCGC ACAAGAAAGG CCGGTATCTG GCCGTCTACT CCGCCGTCAA CGTTCTGTTT
TTGGCCGTAT TGCTGACCTT GAGCTGGATC ATCGAGCCGA GTCTCTGA
|
|---|
| Protein sequence | MRRWLINVAK NETILIVAAI LALISCFIVP PDADYKSYIH ASTISQLICL MIVVCGFQRI
GVFRIIGSRL LEKVSTMRGL VITLVALTFF SAMFITNDVA LVTFVPFAVA VLIMAGQEDK
TILVVTLMTI GANVGSMLTP IGNAHNLYLK ALTGMPTMEF LGIMAPYSGT AAVLLVIVIS
VVFGGKPVGD LGDLETGVLA PERNKHQPDE IRITGYGAGY GGWRTIVYSL LFIVCLLAVS
DVIPLWVMCV IVVVVFLFTD RRVFKYVDWG LPLTFCMFFI FIGNMKRVPE FYELARSLVG
GHPLEVAVGS SQVISNVPTT ILLSGFCDQW RDLIIGTNLG GMGTLIASMA SLISYKNVVR
QYPHKKGRYL AVYSAVNVLF LAVLLTLSWI IEPSL
|
|---|
| |