Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_0697 |
Symbol | abcD |
ID | 6363236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | - |
Start bp | 799308 |
End bp | 799994 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642679857 |
Product | metal ion ABC transporter permease |
Protein accession | YP_001954641 |
Protein GI | 189439560 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2011] ABC-type metal ion transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.388293 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCATCC TCGCCAACCC GCGTAGCGAC TGGAACGTGC TGCGTCCACT ACTGTTCGAA TCCATTGGAC AGACCCTGAC CATGGTGCTC GTGACCCTCG TCATCGGCGG ATTCCTCGGC CTGATCCTCG GCGTGGTGCT CTACGGCACC CGCCCCGGCA ACCTGTTCGA GAACGCGGTC GTCTACCGCA TCCTTGACAT CATCGTCAAC ATCGTGCGCC CGATTCCGTT CATCATTTTC CTGGCAGCCA TGCAGCCGCT CACCATCGTC GTGGTCGGCA CGTCCATCGG CACCGTGGCC GCCATCTTCC CGATGGTGGT CATGTGCACC TTCGCCACTT CTCGTCTGGT CGAACAGAAT CTCGTGCCGG TCGACCCGGG AGTGATCGAG GCCGCGCGTT CGATGGGTGC CGGCAAGCTC ACCATCATCC GCACCGTGCT CATCCCCGAA GCCCTGGCAC CGCTGATCCT GGCCTACGCC TTCCTGTTCA TCGGCGTGCT CGACATGTCT GCCATGGCCG GCTACATCGG CGGTGGCGGT CTCGGTAACT TCGCCATCGC CTACGGCTAC CAGAAGTTCG ACCAGACCGT CACCTGGACG GCCGTGATCA TCATGATCGT ACTGGTCCAG GTGGTGCAGG GCATCGCCAA CGCCATCGCC AAACGACTGC TCAAACGCCA GCAATAA
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Protein sequence | MIILANPRSD WNVLRPLLFE SIGQTLTMVL VTLVIGGFLG LILGVVLYGT RPGNLFENAV VYRILDIIVN IVRPIPFIIF LAAMQPLTIV VVGTSIGTVA AIFPMVVMCT FATSRLVEQN LVPVDPGVIE AARSMGAGKL TIIRTVLIPE ALAPLILAYA FLFIGVLDMS AMAGYIGGGG LGNFAIAYGY QKFDQTVTWT AVIIMIVLVQ VVQGIANAIA KRLLKRQQ
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