Gene BLD_0052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBLD_0052 
Symbol 
ID6363773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBifidobacterium longum DJO10A 
KingdomBacteria 
Replicon accessionNC_010816 
Strand- 
Start bp64862 
End bp65494 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content65% 
IMG OID642679191 
Producthypothetical protein 
Protein accessionYP_001953996 
Protein GI189438915 
COG category[S] Function unknown 
COG ID[COG2314] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00000726443 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGATA ATCAACAACA ACCGTACGGT TCGGACAGTG TTCCGCAGCC GGCACAGCCC 
GCACAGCCGG CACAACCGTC TTACGGCCAA GATGCCGCAC AGCAGCCGCA GGGCTATGGC 
GCCCCACAGC CCGCCGCATA CGCTCAACCC GCCGCCGGAA GCTACGGCCA GCAGCAACCG 
CAATACGGCC AGCCCGCCGG CGCATACGCT CAGCCTCAGT ACGGCCAGCC GCAGTACGGC 
CAGCCGCAGT ACGGCCAGCC CGCACAGCCC GCAGCGGGCT ACGGCCAGCA GCCCGGCTAT 
GGACAGGCTT ACCAGCAGCC GAACGCCTAC GCGCAGCCGC AATACACCGC CGCTCCGTAT 
GCCGCCGCCC CGGTGGGGCA ATCGTCCAAG TCCAAGCTGG CTGCCGGCCT GTTGGGCATC 
TTCCTCGGCG GACTTGGTGT GCACAACTTC TATCTCGGCA ACACCGGCAA GGCCGTGGCC 
CAGCTGCTGC TGACGCTTGT CGGCTGGATT CTGCTCGGAC TTGGCCCAAT CGCAGCCGCC 
ATCTGGGGCT TTGTTGAAGG CATCATCATT CTGTGCAGCA AGCCCGGCTC ACCGTGGCAT 
AAAGACGCCA ACGGCTACGA ACTATCAGAC TGA
 
Protein sequence
MTDNQQQPYG SDSVPQPAQP AQPAQPSYGQ DAAQQPQGYG APQPAAYAQP AAGSYGQQQP 
QYGQPAGAYA QPQYGQPQYG QPQYGQPAQP AAGYGQQPGY GQAYQQPNAY AQPQYTAAPY 
AAAPVGQSSK SKLAAGLLGI FLGGLGVHNF YLGNTGKAVA QLLLTLVGWI LLGLGPIAAA 
IWGFVEGIII LCSKPGSPWH KDANGYELSD