Gene BBta_6890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6890 
Symbol 
ID5151311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp7217028 
End bp7217567 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content63% 
IMG OID640561572 
Productputative pyrimidine reductase 
Protein accessionYP_001242683 
Protein GI148258098 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0262] Dihydrofolate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.041344 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0312743 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATGTGGA ACATGATGAC GCTCGACGGC ATGGTCGCGG GCGCGGAGGG CGACATTTCC 
TGGCACGAGG ATGTCTGGGG CCCGGAGCTC GAGCAATTCT CCGAGGCGCA ATTGAAGGAT
GCCGGAGGAT TGCTGTTCGG TCGCGTGACC TACGATCTGA TGGCGGGCTA TTGGCCGTCG
CAAAACGGCG CGATCGCCGA GTTCATGAAC GCCATTCCGA AATATGTCGC CTCGCGCAAG
CTGTCCGTTC TCGCATGGTC GAATGCGCAT CTGCTGGGCG ATCAGCCAGC CGCCGAGGTC
GACAGGCTCA AGAGGGCGAG CGCCAAGGAT CTGTTCCTGT TCGGCAGTGC GGATTTCGCC
GCCACGCTCA TGGCCCATGA TCTGATCGAC GAGTTCCGCA TCGCGATCAA TCCGCGCGTG
CTCGGCGGTG GAGCACCGCT GTTCAAGCCG GGTCTGGCGA TGAAGCTCCG GTTGATCGAC
AGCCGCCCGC TGTCCAGCGG CGCGGTGATC GTGCGCTATG TGCCTGCGCG GGACGCGTAG
 
Protein sequence
MMWNMMTLDG MVAGAEGDIS WHEDVWGPEL EQFSEAQLKD AGGLLFGRVT YDLMAGYWPS 
QNGAIAEFMN AIPKYVASRK LSVLAWSNAH LLGDQPAAEV DRLKRASAKD LFLFGSADFA
ATLMAHDLID EFRIAINPRV LGGGAPLFKP GLAMKLRLID SRPLSSGAVI VRYVPARDA