Gene BBta_6084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6084 
Symbol 
ID5154712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6310780 
End bp6311469 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content66% 
IMG OID640560798 
Productputative S-adenosyl-L-methionine (SAM)-dependent methyltransferase 
Protein accessionYP_001241917 
Protein GI148257332 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGCGC GCGACTGGTA CTACAACGAA CGGAACCGGA TCGGGCTGGA TCATGCCGTG 
GCCTCGATCT ATGGCGCGGG GGATGATGCG GACGAGCGCG CGCGCGCGGC GCTCAAGATG
CTGGGCGTCA AGCCCGGCTG GCGAGTGGCC GATATCGGCT GCGGCAATGG CGTGCTGGCG
ACGGAAGCGG CGCTGCTGGG CGCGGTCGTC GACGCCATCG ACATCTCCCC GGCGATGCTG
GCGCTGACCA AGATCTACAC CCGCGACCGC CGCACCGCGG TGCGGATGCA TTCGGCCGGC
CTGCTGTCGT TCGCCTATGA GGCCAATTCC TACGACCTGA TCGCCAGCGA GTTCACGCTG
CATCATCTGC CGGACTTCTG GAAGGCGGTG GCGCTCGCGC GGATCTACGG CGCGCTGAAG
CCGGGCGCGC AGTTCTTCCT GCGCGATATC GTCTATGTCA GCATGCCCGA CGGCGCCGAG
CGCTCGATCG AGCAATGGGC CGATTTCAAC ATCAAGAACC ACGACCTCGC CCGCGACAGC
GTCATCACCC ATATGCGCGA CGAGAACTCG ACCTTCGCCT GGGTGATGGA GCGGATGCTG
AGCGAGGTCG GCTTCGTCAC TGTGTCGGCC GACTACCACG CCCCGATGCA CGCGACCTAT
GTGCTGCAGA AGCCGGCGGG GCAGGGGTAG
 
Protein sequence
MLARDWYYNE RNRIGLDHAV ASIYGAGDDA DERARAALKM LGVKPGWRVA DIGCGNGVLA 
TEAALLGAVV DAIDISPAML ALTKIYTRDR RTAVRMHSAG LLSFAYEANS YDLIASEFTL
HHLPDFWKAV ALARIYGALK PGAQFFLRDI VYVSMPDGAE RSIEQWADFN IKNHDLARDS
VITHMRDENS TFAWVMERML SEVGFVTVSA DYHAPMHATY VLQKPAGQG