Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5981 |
Symbol | |
ID | 5154082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 6193719 |
End bp | 6194654 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640560704 |
Product | ABC transporter substrate-binding protein |
Protein accession | YP_001241826 |
Protein GI | 148257241 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.409896 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCATC GGCTCACGGG TGCTGTTGTC GGCTCGGTGT TGACCGCGTT CGCACTGACA TCAGCGGCAC TTGCCCAGAA GATCCAGATC GGCTGCACGG CCACTTCGGA CTGCGCATCG GCGATGATCG CGGTCGACGA GGGCATCTTC AAGAAGCATG GGCTCGACGC CGAGATGGTG CTGATCGGGA TCAATTCGAA CATCCCCGCT GCCATCCTGT CCAACTCGAT CCAGATCGGC GGGCCGACCT CCACGGTCTT CCTGCAGGCC GCCGATGGCG GGCTCGACCT CGTCGCGGTG TCCGGCGCGT CGATCATGAA TAAGACCTCC AACGACGCCA TCGCCGCCTT CGTGCGCAAC GGCATCACCA TCAACAGCCC GCAGGACTTC AAGGGCAGGA AAGTCGGCGC GCCCGGCATC GGCGCCTTCC TGCACGTGCT GTTCGTGAAA TGGCTGGTGG AGAAAGGCGT CGACCCCAAG AGCGTCAACT TCGTCGAGGT CACATTCCCG ACCATGGCCG ACACGATCAA GTCGGGCGGT GTCGACGCCG TGCTGACCGC CGAACCGTTC GTGATGCGCA TGAGCAACGC CAATCTCGGC ACCGTCGGCG CGCGTTACGC GGCCGAGCTT GCCCGCACCG AGCCGATCAT CTTCTACGCA GCGTCGCGCG AATGGGCCGA GAAGAACCCG GCGACGGTGA AGAAATTCCG CGCGGCCATC GCCGAGGCGG CGCCGATCGT CAACAATGAT CGTGACAAAG CCTCGGCCGC AATTGCCAAG TTCACCAAGC AGCCGCTCGA TCTGGTCAAG CTGACGGCGC CCAATCAGTC CGAGCCGATG CTGAAGCCCG AACAGCTCGC CTGGTGGATC GACGTGATGT CGGCGCAGAA GATGCTGCAG ACCAAGCTCG ACCTCAAGAA GCTGATCCTC GACTGA
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Protein sequence | MRHRLTGAVV GSVLTAFALT SAALAQKIQI GCTATSDCAS AMIAVDEGIF KKHGLDAEMV LIGINSNIPA AILSNSIQIG GPTSTVFLQA ADGGLDLVAV SGASIMNKTS NDAIAAFVRN GITINSPQDF KGRKVGAPGI GAFLHVLFVK WLVEKGVDPK SVNFVEVTFP TMADTIKSGG VDAVLTAEPF VMRMSNANLG TVGARYAAEL ARTEPIIFYA ASREWAEKNP ATVKKFRAAI AEAAPIVNND RDKASAAIAK FTKQPLDLVK LTAPNQSEPM LKPEQLAWWI DVMSAQKMLQ TKLDLKKLIL D
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