Gene BBta_5720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5720 
Symbol 
ID5155933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5970038 
End bp5971261 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content69% 
IMG OID640560457 
Productputative phenylacetate-CoA ligase 
Protein accessionYP_001241579 
Protein GI148256994 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1541] Coenzyme F390 synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.776613 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.392142 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACCC ACTACGACGC CCTCGAGACC CGTGATCCCG CCGAACGCGA GCAGGATCTG 
TTCGGCCGCC TGCCCGACGT GCTGCATGCA GCGATCAAGG CGCCCGCCTA TGCCGCGCTG
CTGCAGGGCA TCGATCCCCG GGACATCACG AGCCGCACCG CGCTGGCGCA ATTGCCCGTG
CTGCGCAAGT CGGAGCTGCC GGCCCTGCAC AAGGCCGCTC CCCCGTTCGG CGGCTTCGTC
GCGCAGGCGC CTGGCGCGTT CTCCCGTCTG TTCACCTCGC CCGGCCCGAT CTTCGAGCCA
GAGGCGGCCC ACACCGATCC CTGGCGCGGC GCGCGCGCGC TGTTCGCGGC CGGCTTCCGC
AGCAGTGACG TCGTGCTCAA CACCTTCAGC TATCATCTGA CGCCCGGCGG CTTCATCTTC
GATGCCTCGG CGCGCGCGCT CGGCTGCGCG GTGATCCCGG CCGGACCGGG GAACACCGAG
GCACAGTTCG AGCTGATCGA GGCCTATCGC CCGATCGGCT ACAGCGGCAC GCCCGACTTC
CTCAAGATCC TGCTCGATGG CGCGGCGAGC GCCGGCCGCG ACGTCTCCTC GATCAAGCGT
GCACTGGTGT CGGGCGCGGC CTTTCCGCCG TCCTTGCAGG CCGAGATCAA GGCGCGCGGG
ATCGATGCCT ACCAGGCCTT TGGCACCGCC GATCTCGGCA TCATCGCCTA TGAGACCTCG
GCACGCGAGG GCATGGTGGT CAACGAGGAT CTCATTTTCG AGATCGTCCG CCCCGGCACG
GGTGATCCCG TGGCCGAGGG CGACGTCGGC GAGATCGTCG TCAGCTCGCT CGATCCTGCC
CATCCCTGGA TTCGCCTCGC ACTCGGCGAT CTCACCGCCG CCCTGCCCGG CGTCAGCCGC
TGCGGCCGCA CCAACATGCG CATCAAGGGC TGGATGGGCC GCGCCGACCA GACCACCAAG
ATCAAGGGCA TGTTCGTGCG ACCCGAGCAG ATCGCCGAGA TCGGCAAGCG CCATCCGGAG
CTCGGCCGGC TGCGGCTGGT CGTCACCCGC GCCGGGGAAA CCGACGCGAT GACGTTGAAG
GCCGAATGCG CCGCGCCATC TGATGGCCTG CAGGACGCGC TCGCCACCAG CCTGCGCAGC
GTCACCAAGC TCGGCGGCCA GGTCGAGCTG GTCGCGCCGG GAACGCTGCC CAACGACGGC
AAGGTGATCG CAGACGAGCG CTGA
 
Protein sequence
MNTHYDALET RDPAEREQDL FGRLPDVLHA AIKAPAYAAL LQGIDPRDIT SRTALAQLPV 
LRKSELPALH KAAPPFGGFV AQAPGAFSRL FTSPGPIFEP EAAHTDPWRG ARALFAAGFR
SSDVVLNTFS YHLTPGGFIF DASARALGCA VIPAGPGNTE AQFELIEAYR PIGYSGTPDF
LKILLDGAAS AGRDVSSIKR ALVSGAAFPP SLQAEIKARG IDAYQAFGTA DLGIIAYETS
AREGMVVNED LIFEIVRPGT GDPVAEGDVG EIVVSSLDPA HPWIRLALGD LTAALPGVSR
CGRTNMRIKG WMGRADQTTK IKGMFVRPEQ IAEIGKRHPE LGRLRLVVTR AGETDAMTLK
AECAAPSDGL QDALATSLRS VTKLGGQVEL VAPGTLPNDG KVIADER