| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5685 |
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| Symbol | |
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| ID | 5149600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 5932775 |
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| End bp | 5934043 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640560422 |
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| Product | putative pilus assembly protein cpaE |
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| Protein accession | YP_001241544 |
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| Protein GI | 148256959 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4963] Flp pilus assembly protein, ATPase CpaE |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.744074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.310447 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAACG CGTCCCGTCA GAGCCAGGAG GAGACCGCCG GCCCCAGCGG CGCGGCGCTC
AACGACCATA TCGCGCCGGT GCCGCGCGTC TCGGTGCAGG CATTCTGCGA AACCGATCAG
ACCTCGGCGG CGATCCTCGC CGCCAGCCAG GACCGCCGGC TCGGCAAGGC GCATATCACG
ATCAAGGCGG GCGGCATGCC GCGCGCCATC GAGACCTACC ATTCGCAGCC CACGCCCAAC
GTGATCGTGC TGGAGACGAA GCCCGGCGGC GACATCCTGG GCGGGCTCGA CGATCTCGCC
AGCGTCTACG ATCCCGGCAC CCGCGTGGTG CTGATCGGCA ACCCGGCCGA CGGCGTCGCC
TATCGCGAGC TGGTGCGGCG CGGCGTCAAC GATTATGTGG TCGGACCGGT CGAGACCATC
GACGTGATCC GCTCGATCTG CAGCCTGTTC TCGGCCTCGG AAGCGGTGAT CACCGGCCGC
ATCATCGCCG TGATCGGCGC CAAGGGCGGC GTCGGCGCAT CCACCGTCGC GCATAACGTC
GCCTGGAGCA TGGCGCGCGA TCTGACGCTG GACTCGGTCG TCATCGACCT CGACATGGCG
TTCGGCACCG CCGGGCTCGA CTACAACCAG GATCCGATGC AGGGCATCGC CAATGCCGTG
TTCCAGCCCG ACCGGCCGGA CACGGCGCTG ATGGATCGCC TGCTCGCCAA ATGCACCGAG
CATCTCAATT TGCTCGCCGC GCCGGCGACG CTTGAGCGCG TGTATGATTT TGGCGCCGAT
GCGTTCGACG CGATCTTCGA CACCTTGCGC ATGACCCAGC AATGCATCGT GCTCGACGTG
CCGCATCAAT GGTCGGCCTG GACGCGGCAT GCGCTGATCA ATGCCGACGA CATCCTGGTC
GTCGCCGAGC CCGACCTCGC CAATCTGCGC AACGCCAAGA ACCTGCTCGG CGTGCTCAAG
GCGTCGCGGC CCAATGACCG GCCGCCGCTG TATTGCCTCA ACCAGGTCGG CATGCCTCGC
CGGCCGGAGA TCGACCTCAA GCGCTTCGCC AAGACCGTCG AGGCCGAGCC GGTCGCGGTG
ATTCCGTTCG ACTGCAAGCT GTTCGGCACC GCCGCCAATA ACGGCCAGAT GATCGCGGAG
ATCGCAGCGC TCAACCGCAC GCCGAAGCTG TTCCTGGAGA TCGCAAACCG GCTCACCGGC
CGCGTCGACC CGAAGCCGCA GCGCAGCTCG CTGCTGGCGC CGATCGCCAG GCTGCTCGGG
GCGAAATAG
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| Protein sequence | MINASRQSQE ETAGPSGAAL NDHIAPVPRV SVQAFCETDQ TSAAILAASQ DRRLGKAHIT
IKAGGMPRAI ETYHSQPTPN VIVLETKPGG DILGGLDDLA SVYDPGTRVV LIGNPADGVA
YRELVRRGVN DYVVGPVETI DVIRSICSLF SASEAVITGR IIAVIGAKGG VGASTVAHNV
AWSMARDLTL DSVVIDLDMA FGTAGLDYNQ DPMQGIANAV FQPDRPDTAL MDRLLAKCTE
HLNLLAAPAT LERVYDFGAD AFDAIFDTLR MTQQCIVLDV PHQWSAWTRH ALINADDILV
VAEPDLANLR NAKNLLGVLK ASRPNDRPPL YCLNQVGMPR RPEIDLKRFA KTVEAEPVAV
IPFDCKLFGT AANNGQMIAE IAALNRTPKL FLEIANRLTG RVDPKPQRSS LLAPIARLLG
AK
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