| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5667 |
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| Symbol | |
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| ID | 5150422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 5912704 |
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| End bp | 5913987 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640560405 |
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| Product | putative O-antigen ligase |
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| Protein accession | YP_001241527 |
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| Protein GI | 148256942 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.304337 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.482234 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCT TGGCTGGTCA TCCCGCTCCG ACGCTGCTGG CACGCCGTTG GCGCGATCCC
GCGGCGTGGC GAACCACCGT CGATGTCGTT GCCATCCTGC TGGCGGCCTC TCTGCCATGG
TCGACATCGC TGGTCTCGAT CCTCGGCGTC GTGATGTTGA TCACGATGCT GCCGTTCCTC
GACCTGGCAC GTCTGCTGCA GATCCTGAAG CGTCCGATTT CGCTGGCACC GATCGCTCTG
TTCCTGCTCG CCCTGGTCGG AACGCTGTGG TCGGATGCGG CGTGGGGAGC GAGGCTCTAT
GCCGTCGGGC CTGCAGCCAA ACTTCTGGTG CTTCCCGGCT TGTTCTACCA TTTCGAGCGG
TCCGAACGCG GCCTCTGGGT GTTCACCGCG TTTCTGGCCT CCTGCGTGCT GATGGTCGGG
ATGTCGACGG CCGTGGCGTT CAATCCGGCG CTGGCGCTCA AGGCCAATGC GGATCGCGGC
ATCTTCGTGA AGAACTATAT CGACCAGGGC CAGGAATTCT CGCTCTGTGC GGTGGCGCTG
GCCTATCCGA TCGCGCAGCT GCTGCGCGCC CGCCGGTTCG CGCCGGCCGC CCTGCTGACC
GCGATCATGA TTGCCTTCCT GGCCAACATG ATCTTCATCG TCGTCTCGCG CACCGCGTTG
GTGACGATCC CGATCCTGCT TGCCGTGTTC GGCCTGATCC ACCTGAAATG GCGGGCCAAT
CTGCTGATTG CGGTCAGCGC GCTCGCGCTT GGTCTGGCGG CGTGGTCGGT GTCGCCGCAA
CTGCAGGCCA AGGTCGCGAC CTTCACGAGC CAATATCAGG ACTACAGGAA CGACCGCGGC
GTCACCTCGA TCGGCGAACG GCTGGAATTC TGGCGCAAAT CTCTGCGCTT CTTCGCCGAT
GCCCCGCTGA TCGGACACGG CTCAGGCTCG ACCCGCCATC TGTTCGAGCT GGCGGCAAGC
GAGCGCTCGG ACCTCGCCGC CGGAACGGTG GTCGGCAATC CCCACAACCA GACGCTCAAC
GTCGCCGTCC AGTGGGGGAC GCTTGGGGTC ATCATCCTCT ACGCCATGTG GGCGGTGCAT
CTGCTACAGT TCCGGGGCGA TGGCCTCGTG CCCTGGATCG GGCTTCTCGT CGTCGTGCAG
AACATCTTCA CCTCGTTGTT CAACTCCCAT ATTTTCGATT TCCACGAGGG ATGGATGTAT
GTGATCGGCG TCGGCGTCGC TGGCGGTATG CTGCTGCGAT CGAAGCCAAA GCCCGATGAG
ACCCAGGGAC CGGCCGTGAC ATGA
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| Protein sequence | MSALAGHPAP TLLARRWRDP AAWRTTVDVV AILLAASLPW STSLVSILGV VMLITMLPFL
DLARLLQILK RPISLAPIAL FLLALVGTLW SDAAWGARLY AVGPAAKLLV LPGLFYHFER
SERGLWVFTA FLASCVLMVG MSTAVAFNPA LALKANADRG IFVKNYIDQG QEFSLCAVAL
AYPIAQLLRA RRFAPAALLT AIMIAFLANM IFIVVSRTAL VTIPILLAVF GLIHLKWRAN
LLIAVSALAL GLAAWSVSPQ LQAKVATFTS QYQDYRNDRG VTSIGERLEF WRKSLRFFAD
APLIGHGSGS TRHLFELAAS ERSDLAAGTV VGNPHNQTLN VAVQWGTLGV IILYAMWAVH
LLQFRGDGLV PWIGLLVVVQ NIFTSLFNSH IFDFHEGWMY VIGVGVAGGM LLRSKPKPDE
TQGPAVT
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