Gene BBta_5570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5570 
Symbol 
ID5153228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5797407 
End bp5798102 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content67% 
IMG OID640560313 
Producthypothetical protein 
Protein accessionYP_001241435 
Protein GI148256850 
COG category[S] Function unknown 
COG ID[COG1814] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.492246 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCGA CGCCGCATCT CGAAAAGCAC TTCACCGCTA CAGAAGCCGT TCGTGACGTG 
GTGATCGGGA TGGCGGATGG GCTGACCGTT CCGTTTGCGC TGGCGGCCGG TTTGTCGGCC
GCCGTCACCT CGACCGGCGT GATCGTGACG GCCGGCCTCG CCGAGGTCGT CGCGGGTGCG
ATCGCGATGG GGCTGGGAGG CTATCTCGCG GCCCGGACCG ACGCCGAACA TTATGCGGCC
GAGGAGAGGC GGGAGAATGA CGAGATCGAC CGCCTCCGTA GTCGGGAAAT CGAAGAGGTG
GCGGCGATCT TCAGAGATTA CGGGCTCAAG GGCGACGCCC TGACGACGGT GGTCGAGGCG
ATTGCGGCCG ATCGCAAGCG CTGGGTCGAC TTCATGATGC GCTTCGAGCT CGGCCTCGAA
CGTCCCGATC CCAAGCGCGC GCCGGTCAGC GCGGTGACGA TCGGCGGCTC CTACGTGATC
GGAGGGCTGA TCCCGCTGAT CCCCTACATG CTGGTCCACG ACATTTCGGG CGCGCTGCGC
ATCTCCGTGA TCGCGACCGG CGCGGCGTTG CTGATCTTCG GCGCCATCAA GGGCCACTTC
ACCGGCGTCA GCAAGGTCAA GTCGGCCTTG CAGACCGCGC TCGTCGGCGG CCTCGCCGCC
GGCGCCGCAT TCTGGCTGGC CCATCTGTTC GGGTAG
 
Protein sequence
MPATPHLEKH FTATEAVRDV VIGMADGLTV PFALAAGLSA AVTSTGVIVT AGLAEVVAGA 
IAMGLGGYLA ARTDAEHYAA EERRENDEID RLRSREIEEV AAIFRDYGLK GDALTTVVEA
IAADRKRWVD FMMRFELGLE RPDPKRAPVS AVTIGGSYVI GGLIPLIPYM LVHDISGALR
ISVIATGAAL LIFGAIKGHF TGVSKVKSAL QTALVGGLAA GAAFWLAHLF G