| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5518 |
|---|
| Symbol | |
|---|
| ID | 5152310 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 5736575 |
|---|
| End bp | 5736949 |
|---|
| Gene Length | 375 bp |
|---|
| Protein Length | 124 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640560263 |
|---|
| Product | putative transcriptional regulatory protein |
|---|
| Protein accession | YP_001241385 |
|---|
| Protein GI | 148256800 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1733] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.263293 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGCCG CGAACGTCTA TTCGGCCGAC TGCCCGACCC GCCAGATCCT CGATCGGGTC
GGCGACAAAT GGGCGGTGCT GATCCTGATC CTGCTTCGCA ACCAACCCTT GCGCTTCAAC
CAGTTGCGCC GAACAATCGA AGGCATTTCG CAGAAGATGC TGTCGCAGGT GCTGAAGAGC
CTGGAGCGCG ACGGGCTGGT GCGGCGGCGC GCGATCGCGA CGGTGCCGGT GACGGTGGAA
TATTCGATCA CGCCGCTCGG TCTGACCTTG GCCGCCGCGG TCGATCCATT GCGCGACTGG
GCGGAGCGGC ATCTGAAGGA CGTCAGCGCC GCACAACGGC GCTATGACGC GCAGCAGACC
TCGAAGGCGG CGTAA
|
|---|
| Protein sequence | MRAANVYSAD CPTRQILDRV GDKWAVLILI LLRNQPLRFN QLRRTIEGIS QKMLSQVLKS
LERDGLVRRR AIATVPVTVE YSITPLGLTL AAAVDPLRDW AERHLKDVSA AQRRYDAQQT
SKAA
|
|---|
| |