Gene BBta_5351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5351 
Symbol 
ID5155997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5577426 
End bp5578013 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content66% 
IMG OID640560111 
ProductTetR family transcriptional regulator 
Protein accessionYP_001241235 
Protein GI148256650 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0124857 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAGG CCGTGGTTCT GACATCCGAG CGCATCCTCG AAGTCACCGA GGACGTGTTG 
CGCCGTTACG GGCTCGCCAA AGCGACGGTC GTCGACGTCG CAAGGGCGCT CGATGTCAGC
CACGGCTCCG TCTACCGTCA TTTTCCGAGC AAGGCGTCGC TGCGTGAGGC AGTGGCGAAA
CGCTGGCTCG AGCGCGTCAG CAAGCCGCTG GCGCAGATCG CCGCCGAGCC GGGGCCGGCC
CCGGCCAAGC TGGAGCGCTG GCTGCGCGAG CTGTTCGGCG CCAAGCACAA GCGGGTCTGC
GAAGACCCCG AGATGTTCGC CACCTATCTG ACCCTGGCGC GCGAGGCGTG TTCGGTGGTC
AAGGCGCACA AGCAGGATCT GATCGCCCAG GTCGAGGGCA TCATTGCCGA AGGCGTCGCC
CAGGGCGCGT TCGAGGTCGC CGATCCGAAA ACTGCGGCCG CTGCGATCTT CGACGCGACC
AGGAGCTTCC ATCATCCGGC TCACGCCGAC GAGTGGGGCG AATGCACCTG CTCGGCCCGG
GTCGATGCCG TTCTGACCCT GTTGTTGCGC GGATTGCAGG CGCGATAG
 
Protein sequence
MNEAVVLTSE RILEVTEDVL RRYGLAKATV VDVARALDVS HGSVYRHFPS KASLREAVAK 
RWLERVSKPL AQIAAEPGPA PAKLERWLRE LFGAKHKRVC EDPEMFATYL TLAREACSVV
KAHKQDLIAQ VEGIIAEGVA QGAFEVADPK TAAAAIFDAT RSFHHPAHAD EWGECTCSAR
VDAVLTLLLR GLQAR