Gene BBta_4980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4980 
Symbol 
ID5148865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5215347 
End bp5215748 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content61% 
IMG OID640559764 
Productputative transposase 
Protein accessionYP_001240893 
Protein GI148256308 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.733834 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGCAA GAGGGAAGAC CCGTCGGTTT CCGACGGCTT ATAAGCTGAA GGCGATCAAG 
CGTGTCGAAC GAGGCGAAGG CGTTCTGCCT GTGGCTCGGG ACCTTGGGAT ATCGCGCAAG
ATCCTGCATG ACTGGATCAA GGCCTGGAAG GCGCAAGGGC CGGACGGATT GAACCGCAAG
CCAGGGCCGA AGCCCGGTCC CCGGAAGCTC AAAGCTCTGG CAACCTATGA CGACAAGCGG
TCCACGCTGG CGCGGGCCAA TCCCCGCATT GCTGAGCTCG AACGACTGGT CGGCCGTCAG
CAGATGGACC TCGATTTTTT TCGGCAAGCC TTGCGCGCAC TGGAGCGGCC GGCAGCGCAA
GGCAAACCCG TATCCGCATC ATCGAAGTCA TCAAAAGCAT GA
 
Protein sequence
MAARGKTRRF PTAYKLKAIK RVERGEGVLP VARDLGISRK ILHDWIKAWK AQGPDGLNRK 
PGPKPGPRKL KALATYDDKR STLARANPRI AELERLVGRQ QMDLDFFRQA LRALERPAAQ
GKPVSASSKS SKA