| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4186 |
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| Symbol | |
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| ID | 5152398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 4394819 |
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| End bp | 4397101 |
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| Gene Length | 2283 bp |
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| Protein Length | 760 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640559014 |
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| Product | hypothetical protein |
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| Protein accession | YP_001240151 |
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| Protein GI | 148255566 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
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| TIGRFAM ID | [TIGR03661] type 1 secretion C-terminal target domain (VC_A0849 subclass) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.394785 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGACA TTGCCTCACC GATCGTGATC AGTGCGCCGG TTGGCTCTGT GATCAACATG
GCGGACTACA TCTCGCAGCT GTTCTCGGGT GCGAGCTACG CCGGATATTA TTTCTACGAC
GGCTCGATCG ACGAAAGCCA GTTCGGCTAT TGGGGCAGCG CCCGGATCAA CAGCCGCTTC
GCCTATAACG GCACGGCCGA GCCGGTCGAC ACCGCCTTCT ACGTCCCTGC GGCGCAGCTC
AACAACCTGC AGCTCGTCGT CGGCAACGAG ATCGAGCCCA GCATCTACTG CTACGCGGCG
TTCGGCCCGG GCTACGGCTC GTACATGAAG ATCAGCATCG TGCCGACGCT GTACAACGAC
CCGACGCCGA ACGCGATCAC CGGCGACGAC GTCGTCGCCG CCGCCAGGAC CTATCTGCAG
CTCTACCAGG GCTCCGCCAG CCCCAATGGC TGCCACTCGA TCGCGTCGGA CTACGCTGCG
GCCGCCGGCG CGCCGCTGCC GGCGATGTCG GGGTCGCTGA CCCCGTCGCA GAATCTCGAT
GGCGGGCTGT GGAGCGCGAT CTTCAAGGGC GACGTCACCC CCGACCCGAA CTGGCAGAAC
CGCCTGCAGC CGGGCGACAT CGTCCGCTTC GACTATGCCG ATCCGAGCAA GTCGCAGCAC
ACCTTCACGG TGATGAGCGT GGCCAATGGC AAGGTCGATA CGATCGACAA TTGGAACGCC
GCGCTCGGCG AGCACCAGAC CGATTTCAGC CAGCTCGCCA ATGCCTCAAC GGTCACGATC
TACCGCATCA CCGACCAGTA TTATCACCTC TCGGGAACGG TGAATGACGA CCTCCTGATC
GGCAGCGTCA AGAACGATGC CATCGATGGC GGCGCCGGCA ATGACACCAT CTATGGCGGC
GTCGGCAACG ACATTCTCAA CGGCCAGGCC GGCAACGACA TCCTCCGCGG CGGCGAAGGC
GGCGACGTCA TCAATGGCGG CGACGGCATC GACACCCTGT TCGGCAATCA AGGCGGCGAC
CGCTTCGTGT TCGACCAGGC GATCCTGGCA TCCAACACCG GCGTCAATTC CGACCTGATC
CAGGATTTCA ACCGCGGCAA TGCCGGCGTC TACAGTGCCG CCGAGGGCGA CACGATGGAC
CTGAGCGCCC TGCTCTCCTG GGGCGTCCAT GCCGGCCAGA CCGCCGATCA TCTCGTTCGC
GTCGTCGAGG ACCAGAGCGG CGCCTTCGCC GACGTCCAGA TGGACAGCGA CGGCCTGAAT
GGCGGCGTGC ACTGGACCAC CATCGCCCAT GTCGCCGGCA CACACCAATC CGAGACATTC
CGCTTCCTGC TCGACGCCGG CGTGAGCGCC AGCACCGGCG TCCAGGGCGA TTATGGCCTG
ACCGGCGATT TCGACGGCGA CGGCAAGGCC GATATCCTCT GGCGCAACGA CAGCGGCACC
CTGGCGCAAT GGCAAATGAA CGCCGCCCAG GTGATGGCCG GCCCGCAGCT CGGCTCCGTC
CCGGACAACA GCTGGCACGT CGTCGGCGTC GCCGACTTCA ATGGCGACGG CAAGAGCGAC
CTGTTGTGGC GCAACGACAG CGGCGCGCTC GCCGAATGGA TGATGAACGG ATCGCAGATC
GTCTCCGGAC CAGGCATCGC CTCCTCGCCC GACAAGAGCT GGAACGTCGC CGGCACCGCT
GATTTCGACG GCGACGGCAA GGCCGACATC CTCTGGCGCA ACGACAGCGG CGGGCTGGCG
CTGTGGACGA TGAACGGCGC GCAGGTGCTG TCCGGGCCGA ACATCGGCTC GTCACCCGAT
CCGAGCTGGC ACATCGTCGG CGTCGATGAT TTCGGCGGCG ACGGCAAGGC CGATATTCTC
TGGCGCAACG ACAATGGCAC GCTCGCGGAA TGGTCGATGA ACGGATCGCA GATCCTGGCC
GGGCCTGCGA TCGGCTCGGT GCCCGACCTG TCCTGGCACG TCGTCGCCAC CGGCGATTTC
AACGGCGACG GCAAGGCTGA CATTCTCTGG CGCAATGACA GCGGCACGCT GGCCGAATGG
CAAATGAACA ATGGCCAGAT CCTGGCCGGC CCGCAGATCG CCTCCACCCC CGACCTGTCC
TGGCATGTCA TCGGCACCGG CGATTTCAAC GGCGACCACA AGACCGACAT TCTCTGGCGC
AACGACAGCG GCACCTTGGC GGAATGGACC ATGGACGGCG CCCAGGTGCT GGCCGGCCCG
CAGATCGGCT CGATCCCTGA CGCCACATGG AAGACGGTCG CCCACCATTA TGATTTCGTC
TGA
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| Protein sequence | MADIASPIVI SAPVGSVINM ADYISQLFSG ASYAGYYFYD GSIDESQFGY WGSARINSRF
AYNGTAEPVD TAFYVPAAQL NNLQLVVGNE IEPSIYCYAA FGPGYGSYMK ISIVPTLYND
PTPNAITGDD VVAAARTYLQ LYQGSASPNG CHSIASDYAA AAGAPLPAMS GSLTPSQNLD
GGLWSAIFKG DVTPDPNWQN RLQPGDIVRF DYADPSKSQH TFTVMSVANG KVDTIDNWNA
ALGEHQTDFS QLANASTVTI YRITDQYYHL SGTVNDDLLI GSVKNDAIDG GAGNDTIYGG
VGNDILNGQA GNDILRGGEG GDVINGGDGI DTLFGNQGGD RFVFDQAILA SNTGVNSDLI
QDFNRGNAGV YSAAEGDTMD LSALLSWGVH AGQTADHLVR VVEDQSGAFA DVQMDSDGLN
GGVHWTTIAH VAGTHQSETF RFLLDAGVSA STGVQGDYGL TGDFDGDGKA DILWRNDSGT
LAQWQMNAAQ VMAGPQLGSV PDNSWHVVGV ADFNGDGKSD LLWRNDSGAL AEWMMNGSQI
VSGPGIASSP DKSWNVAGTA DFDGDGKADI LWRNDSGGLA LWTMNGAQVL SGPNIGSSPD
PSWHIVGVDD FGGDGKADIL WRNDNGTLAE WSMNGSQILA GPAIGSVPDL SWHVVATGDF
NGDGKADILW RNDSGTLAEW QMNNGQILAG PQIASTPDLS WHVIGTGDFN GDHKTDILWR
NDSGTLAEWT MDGAQVLAGP QIGSIPDATW KTVAHHYDFV
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