| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4161 |
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| Symbol | |
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| ID | 5155938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 4371514 |
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| End bp | 4373337 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640558990 |
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| Product | putative esterase/lipase/outer membrane autotransporter |
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| Protein accession | YP_001240128 |
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| Protein GI | 148255543 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3240] Phospholipase/lecithinase/hemolysin |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.930949 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.682493 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCAACCAT CGGGGCCCGC GTCCGCCCAA ACCGCCTTCA CGCGCATTCA GGCCTTCGGC
GACAGCTACG CCGATACGGG CAATCTCTGG ACCTTCACTG GCGGCATCGG CAAGCTGCCG
CTCTATCCCA CCGGGCGCTT CAGCGGCGGC ACCAATTTCG TCGACACGAC CTCGGCGCTG
CTCGGCATCC CCCAGCTCAA TTACGCCATC GGCGGCGCCA CCAGCGGCAC CACCAACGTG
GCCGGCCCCG GCATTCCCGG CTTCTTCCAG GAATGGAGCG GATTGACCGG ATTTTCGGGC
AAGATCTCGT CGACCGATCT GGTCGAGATT TCGATCGGCG GCAATGATGC GCGGGCCTAT
TACCGCGCCG GCGGTTCGCT CGCCGGTGCA CCGGTCGCCG CCGCGGTCAC CGCGCAGCAG
GCGATGGCCG GCATCAACGC GCTGGTCGGC AGCGGCGCGC GCAACATCGT GTTCACGGCC
GGCGATGTCA GCACGCTGCC GGAGGCGGTC GGCAACGCCA ATGCGCCAGC CGGCGCGGCC
TACAGCAGGA CCTATAACAG CCTGATGCAG GCATCGCTCG CCGGCGTTGC GCGCTCGGGC
GTGCGCGTCG AATATGTCGA CACCGGGCTG ATCGGCACGC TGATCCAGGC CAATCCGCAG
CGCTACGGCT TCAGCAATGT CGGTGCGTGT CCGGTCGCCT GCATCGGCAA TCCGGCGCTG
CAGAACCAAT ATCTGTTCTA TGTCGACGGG GTGCACCTGA CCTCGCACGG CTTCGAGGTG
CTCGGGCAAT ACATCGTCAA CCGCCTCAAC GCGCCGCTGA CCTTTGCGCC GCAGGGCGAC
GTGGCCTCGA TCACGGCCAT GGGCTTTGCC GCGACCTTGT TCGGCAAGCT CGATCAGTTC
CGCGAAACCG CCGGGTTCGC GCCGTCGACG ATGAATTCGT TCGCGGCCGT CACCAAGGCG
CCTTACACCA AGGCGCCGCC GCTCGCGGCC ATCAGCCCGT GGTCGTTCTA CATGCAGGGT
AATGGCGGCA TCAGCGACCG GCAGGGCAAT GTCGCCGCCA ACGGCTTCAA TCTCGACAGT
GTCGGCGGCA CCATCGGCGT CGAGTACCGG CTATCGGCGA ATGCCCTCAT CGGCACCGCC
TTCGACTATT CCAATCCGAA GGCGCGGCTG TTCAACAATG CCGGCACCAC CGACGCGAAC
TCCTATCAGT TCGGCCTGTA CGGTGCCTGG GCCAGCAGCA ACCTGTTTGC CGAAGGCCTC
GCCACCATCG GCCACCAGGA TTATCGCAAC ACAAGGCCGG GCGTCGTCGA CACCATCACC
TCCAATCCCG GCGGCACCAC CTTCGTCGCC GCCGGCAAGG CCGGCTATCT GTTCGATGCC
GGCGCCGCCA AGATCGGGCC GATCGGCGGC CTGACCTATG CGCGGGCTCG CGTCGATGGC
TTCACCGAGG CCGGTGATCC CGCGCTGACG CTGACCGTCG GCTCGCAGAC CGCCGAGACC
CTGATCGGCA GCTTTGGCGT GCAGCTGCGG ACCCCGTTCC AGATGCAGGG CGCCACGATC
CATCCCTATC TGAACCTGAC GCTCGACGAC GACATCATCG GCAATGGCCG CCTGATCCAG
TACAGCGCGA CCTCGGCGCC CGTGATCGTC AACAACTGGA CGGTGCCGAA CGGCACCTCG
CACAATGTGT ATGGCCGGGT CAGCGCCGGC GTGGTGGCGC CGTTCTGGAG TAATGTGGCG
CTGACGGCCA ACGTGTCGCG CACCATCGGC CGGAGCGGCG GCGACGACTT CTTCGGCAGC
GGCGGGCTGA AGATCTCGTT CTGA
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| Protein sequence | MQPSGPASAQ TAFTRIQAFG DSYADTGNLW TFTGGIGKLP LYPTGRFSGG TNFVDTTSAL
LGIPQLNYAI GGATSGTTNV AGPGIPGFFQ EWSGLTGFSG KISSTDLVEI SIGGNDARAY
YRAGGSLAGA PVAAAVTAQQ AMAGINALVG SGARNIVFTA GDVSTLPEAV GNANAPAGAA
YSRTYNSLMQ ASLAGVARSG VRVEYVDTGL IGTLIQANPQ RYGFSNVGAC PVACIGNPAL
QNQYLFYVDG VHLTSHGFEV LGQYIVNRLN APLTFAPQGD VASITAMGFA ATLFGKLDQF
RETAGFAPST MNSFAAVTKA PYTKAPPLAA ISPWSFYMQG NGGISDRQGN VAANGFNLDS
VGGTIGVEYR LSANALIGTA FDYSNPKARL FNNAGTTDAN SYQFGLYGAW ASSNLFAEGL
ATIGHQDYRN TRPGVVDTIT SNPGGTTFVA AGKAGYLFDA GAAKIGPIGG LTYARARVDG
FTEAGDPALT LTVGSQTAET LIGSFGVQLR TPFQMQGATI HPYLNLTLDD DIIGNGRLIQ
YSATSAPVIV NNWTVPNGTS HNVYGRVSAG VVAPFWSNVA LTANVSRTIG RSGGDDFFGS
GGLKISF
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