Gene BBta_4116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4116 
Symbol 
ID5154617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4324072 
End bp4324731 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content67% 
IMG OID640558947 
Producthypothetical protein 
Protein accessionYP_001240085 
Protein GI148255500 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.252565 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.544851 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CTGCCGCGTC AGGTTGACGC GCAAGGCCTG TTCAAGGGCA TGGAGCAGGG GGCTCGCGAG 
GGCAACAGGG CCGCCGGTCC GGTTGGCGGG GTGCTGGGCG GCGCGATCGG CGGGGTCGTC
GGCGTGGTCA CCGGCGTTAC CGGGGTACTC ACCGGAAATG AGGCACAGCC CAACCCGCGC
AGCGCAGCTC CGCCGGAGGG CAACCCACCG GCGGAAGCCA AGAAGGGCAA ATCGTCCAAG
GTCGCCAAGG CCAGCAAGCC TGCCAAGGCC GCGCCGATGC TGACGCAACA AGGTACGCCG
CAACTGACCG CCGAGCAGAT CGTCGCCAAC AGCGACAGCA ATGTCGAGCG TCTGAAGGTC
GGTCTCAACC TCACCGCGGA GCAGGAAAAG AACTGGGCAC CGTTCGCCAA TGCGATGCAC
GCGCTTGGCC GCAACGGCGC CGATCGCTTG AACCTGCGCA TCGCGCGGTC GAAGCGAGAT
CCGCCGGATG ACATCATCGA GCAGATGCGC AACGAGGCGC AGTTCCTGGT CGATCGCGCC
GCCGACCAGC GCGCGGTGTC CGACGCGGCG GAGCCGCTCT TCACCAGCCT GGATGACAAG
CAGAAGCAGA TGTTCATCGA CGAGATGGTC CGTCTCAGCC ACGAGCGTGG GCTGGACTGA
 
Protein sequence
MPRQVDAQGL FKGMEQGARE GNRAAGPVGG VLGGAIGGVV GVVTGVTGVL TGNEAQPNPR 
SAAPPEGNPP AEAKKGKSSK VAKASKPAKA APMLTQQGTP QLTAEQIVAN SDSNVERLKV
GLNLTAEQEK NWAPFANAMH ALGRNGADRL NLRIARSKRD PPDDIIEQMR NEAQFLVDRA
ADQRAVSDAA EPLFTSLDDK QKQMFIDEMV RLSHERGLD