Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3675 |
Symbol | |
ID | 5154291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 3838804 |
End bp | 3840465 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640558515 |
Product | sulfate thiol esterase SoxB |
Protein accession | YP_001239661 |
Protein GI | 148255076 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0941118 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCGGCGG CTGCCCTGAC GGGCGGCGCC AGCCTCGCGG GCACATCCCG CGCCTTTGCG CAACAGAAGC TGACCGAGAA GGAGCTTCTG GCGTTCGATC CGCTCGGAAA CGTCACCCTG GTGCATGTCA CAGACATCCA CGGCCAGCTG ATGCCGCTTT ATTTCCGCGA GCCCTCGACC AATCTCGGGG TCGGCGACGC CAAGGGGCAA CCGCCGCATG TCACCGGCAA GGAGTTTCTG ACGCGGTTCG GCATTGCGCC CGGATCGTCG TCCGCCTATG CGCTGACCTC GGAGGATTTC GAGGCGCTTG CCAAGACCTA CGGACGGATC GGCGGACTCG ATCGCGCCGC GACCGTCATC AAGGCGATCC GCGCCGAGCG CGGCGACAAG GTCGCGTTGC TCGACGGCGG CGACACCTGG CAGGGGTCCT GGTCGTCGCT GCAGACCCGC GGCCAGGACA TGATCGACTG CATGGCGTTG CTGAAGCCGG ATGCGATGAC CGGGCATTGG GAGTTCACCT ACGGCACAGA GCGCGTCAAG CAGGCGGTCG ACGGGCTCGG CTTTCCGTTC CTCGGCCTCA ACATCCGTGA CACCGAGTGG AATGAGCCGG CGTTCGAGGC CTCGACGATG ATCGAGCGGG GCGGCGTCAA GATCGCAGTG CTCGGCCAGG CCTTCCCGTA TACACCGGTG GCCAATCCGC GCTGGATGAT CCCGAACTGG TCGTTCGGCG TGCGCGAGGA GGATGTCCAG ACCCAGGTCG ACAAGGCGCG CAAGGCCGGC GCCGGGCTGG TGGTGCTGCT GTCGCACAAC GGCTTCGACG TCGACCGCAA ACTGGCCAGC CGCGTCAAGG GTCTCGACGT CATTCTCACG GGCCACACCC ATGATGCGCT GCCCGAAGCG GTCAAGGTCG GCAAGACGCT GCTGATCGCA TCCGGCTCCT CCGGCAAGTT CGTGTCGCGG CTCGATCTCG ACGTCAAGGA TGGCGAGGTC AAGGCCTATC GCTACAGGCT GATCCCGCTG TTCTCCGACG TGATCACGCC GGATACGGCG ATGGCAGCCA AGATCGCTGA GGTGCGCAAG CCGTTCGCGG CCGATCTCGG CCGCGCGCTC GGACGCACCG AGACGCTGCT GTACCGCCGC GGCAACTTCA ACGGCACGTT CGACGATCTG ATCTGTCAGG CTCTGCTGCA GGAACGCGAT GCGGAGATTG CGCTGTCGCC GGGCTTCCGC TGGGGCACCA GCGTCATGCC GGGCCAGGAC ATCACCTTCG AGGACGTCAC CAACGCCACC GCGATCACCT ATCCCGCGGT CTATCGCATG GGCATGACCG GCACGCGCCT CAAGGAAATC ATCGAGGACG TGGCCGACAA TCTGTTCAAT GTCGACCCCT ACTACCAGCA GGGCGGCGAC ATGGTCCGCA TCGGCGGCAT GTCCTACGCG ATCGACGTCA ACAAGCCGCA AGGACAGCGC ATCTCCGACA TGCGCCTGAT CAAGACCGGC GCGGTGATCG ATCCGGCGCG CGAGTATCAG GTCGCCGGCT GGGCCAGCGT CAACGAGGGT ACGCAGGGCC CGCCGATCTG GGAGGTCGTG TCGGGCTATC TGCAGCGTCA GAAAACCGTT CGTCTCGAGC CCAATCGGGC CGTCAAAGTC TCCGGAGTGT GA
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Protein sequence | MAAAALTGGA SLAGTSRAFA QQKLTEKELL AFDPLGNVTL VHVTDIHGQL MPLYFREPST NLGVGDAKGQ PPHVTGKEFL TRFGIAPGSS SAYALTSEDF EALAKTYGRI GGLDRAATVI KAIRAERGDK VALLDGGDTW QGSWSSLQTR GQDMIDCMAL LKPDAMTGHW EFTYGTERVK QAVDGLGFPF LGLNIRDTEW NEPAFEASTM IERGGVKIAV LGQAFPYTPV ANPRWMIPNW SFGVREEDVQ TQVDKARKAG AGLVVLLSHN GFDVDRKLAS RVKGLDVILT GHTHDALPEA VKVGKTLLIA SGSSGKFVSR LDLDVKDGEV KAYRYRLIPL FSDVITPDTA MAAKIAEVRK PFAADLGRAL GRTETLLYRR GNFNGTFDDL ICQALLQERD AEIALSPGFR WGTSVMPGQD ITFEDVTNAT AITYPAVYRM GMTGTRLKEI IEDVADNLFN VDPYYQQGGD MVRIGGMSYA IDVNKPQGQR ISDMRLIKTG AVIDPAREYQ VAGWASVNEG TQGPPIWEVV SGYLQRQKTV RLEPNRAVKV SGV
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