| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3554 |
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| Symbol | |
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| ID | 5151697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 3710871 |
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| End bp | 3712193 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640558406 |
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| Product | putative ABC transporter periplasmic-binding protein |
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| Protein accession | YP_001239552 |
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| Protein GI | 148254967 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.263542 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTATT TCCCTACGGA TCGACGGTCT CTGCTCAAGG GTGGCGCGAC CTTGCTGGCG
GCCGCGGCGA CGATGTCGGC CGAGGATCTG CTCGGCTACG CCAAGGCCTG GGCGCAGACC
TCGCCCTGGA AGCCGGAGCC GGGCGCAAAG GTCAACATGA TGCGCTGGAA GCGCTTCGTC
GAGGCCGAGG ACGTGGCCTT CATGAAGATC GTCGACGCCT TCCAGAAGGC CAACAACGTC
ACCATCAACA TCTCCAACGA ATCCTATGAC GATGTCCAGC CCAAGGCCTC GGTCGCGGCC
AATACAGGGC AGGGGCTCGA CATGGTGTGG GGCCTCTACA CGCTGCCCTT CCTGTTCTCC
AACAAATGCG TCGACATGAC CGACGTCGCC GACTACCTCG GCAAGAAGTG CGGCGGCTGG
ACCGACTCCG GCAAGGCCTA TGGCATGCTC GACGGCAAGT GGATCGGCAT CCCGGTGGCG
GCCACCGGCG GCCTGATCAA CTATCGCATC TCGGCGGCCG AGAAGGCCGG CTTCAAGCAG
TTCCCGAAGG ACCTTGCCGG CATGGCCGAG TTCTTCAAGG CCATGAACAA GAACGGCACG
CCAGGCGGCA TGGCGCTCGG CCACGCCTCG GGTGACGCCA ATGGCTGGGT GCACTGGGCG
CTGTGGGCGC ATGGCGGCAA TCTCATCGAC AAGGACAACA AGGTCGTCAT CAACTCGCCG
GAGACCGCCA AGGCGCTCGA ATACGTCAAG GGCCTGTACG ACAATTTCGT GCCGGGCACC
GCGTCGTGGA ACGACTCGTC CAACAACAAG GCGTTCCTGG CCGGCCAGCT CTACGCGACC
GTCAACGGCA TCTCGATTTA CGTGACCGCC AAGAAGGAGG CGCCGCAGAT CGCCGAGGAC
ATGAACCACG CGCATCTGCC GCCCGGCATC GACGGCAAGA CCCGCGAGAT GCATCTGGGC
TTCCCGATCC TGGTGTTCAA CTTCTCCAAG TACCCGCAGA CCTGCAAGGC GTTCACCGCC
TTCATGCTGG AGCCGGAGCA GTTCAACCCG TGGATCGAGG CGGCGCAGGG CTATCTGTCG
CACTTCCTCA AAGGCTACGA CGCCAATCCG ATCTGGACGG CCGATCCGAA AAACACGCCG
TACCGCGACG TTGCGGCAAC CGCCACCACG CCGGCCGGAC TCGGCAAGCT CGGCGAAGCG
GCCGCGGCTG CGATCGCCGA TTTCGTGCTG GTCGACATGT TCGCGAACTA CTGCACCGGC
CGCGAGGACG TGAAGACGGC GATGGCCAGC GCCGAGCGCT CGGCCAAGCG CATCTTCCGC
TAG
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| Protein sequence | MTYFPTDRRS LLKGGATLLA AAATMSAEDL LGYAKAWAQT SPWKPEPGAK VNMMRWKRFV
EAEDVAFMKI VDAFQKANNV TINISNESYD DVQPKASVAA NTGQGLDMVW GLYTLPFLFS
NKCVDMTDVA DYLGKKCGGW TDSGKAYGML DGKWIGIPVA ATGGLINYRI SAAEKAGFKQ
FPKDLAGMAE FFKAMNKNGT PGGMALGHAS GDANGWVHWA LWAHGGNLID KDNKVVINSP
ETAKALEYVK GLYDNFVPGT ASWNDSSNNK AFLAGQLYAT VNGISIYVTA KKEAPQIAED
MNHAHLPPGI DGKTREMHLG FPILVFNFSK YPQTCKAFTA FMLEPEQFNP WIEAAQGYLS
HFLKGYDANP IWTADPKNTP YRDVAATATT PAGLGKLGEA AAAAIADFVL VDMFANYCTG
REDVKTAMAS AERSAKRIFR
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