Gene BBta_3525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3525 
Symbol 
ID5150686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3677031 
End bp3677615 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content64% 
IMG OID640558377 
Producthypothetical protein 
Protein accessionYP_001239524 
Protein GI148254939 
COG category[S] Function unknown 
COG ID[COG2128] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain
[TIGR01926] uncharacterized peroxidase-related enzyme 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGC CTGCCATCAG CCGCTTCCCC GTCCCCGCGA TCGATGCGCT GCCCGACGAC 
ATCCGCACCC GCCTCCTGGC GGTGCAGGAG AAGAGCGGCT TCGTGCCCAA CGTCTTCCTG
ACGCTCGCGC ACCGGCCGGA CGAGTTCCGC GCCTTCTTCG CCTACCACGA CGCTCTGATG
GAGAAGGACG GCGGCCTGAC CAAGGCCGAG CGCGAAATGA TCGTGGTGGC AACCTCGAGC
GCCAATCAGT GCCAATATTG CGTCATCGCC CACGGCGCGA TCCTGCGCAT CCGCGCCAAG
AATCCCCTGA TCGCCGATCA GATCGCGATC AACTACCGCA AGGCCGACAT CACGCCGCGG
CAGCGCGCAA TGCTCGATTT CGCGATGAAG GTCGCGCTTG AGGCCCAGGC GGTGGACGAC
GCCGATTTCA AGACCCTGGC AAGCCACGGC TTCAGCGACG ACGATATCTG GGACATCACG
GCGATCGCCG CCTTCTTCGC GTTGTCAAAC CGGATCGCCA ATGTCACGGG CATGCGGCCC
AATGACGAGT TCTATCTGAT GGGCCGGTTG CCGAAGGCGA AGTAG
 
Protein sequence
MTQPAISRFP VPAIDALPDD IRTRLLAVQE KSGFVPNVFL TLAHRPDEFR AFFAYHDALM 
EKDGGLTKAE REMIVVATSS ANQCQYCVIA HGAILRIRAK NPLIADQIAI NYRKADITPR
QRAMLDFAMK VALEAQAVDD ADFKTLASHG FSDDDIWDIT AIAAFFALSN RIANVTGMRP
NDEFYLMGRL PKAK