Gene BBta_3439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3439 
Symbol 
ID5149583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3587480 
End bp3588592 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content58% 
IMG OID640558292 
Producthypothetical protein 
Protein accessionYP_001239439 
Protein GI148254854 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.190134 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.242294 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGACG TCTTTCTAGC AATGTCGGCT TGTCAGGATC CTATGGAAGA CGCGAAGGGC 
TCACGGGGAA GCTTGGAGCA GGTCAGCACC CGTTCGTTTA CCCGCCGGCT GCTCATCGTG
TGTCTGGTCG GCGCAATGAT GCTTGCCGTC TGGAAGCTTG CCGATCTGGT GGTGCTTGCC
TTCGGCGCAG CGCTTCTGGC TCTTTTGTTG CGCGGGGTGG TCCACGAGGT GAGCCGAAAC
ACGCGATTGC CGGAGCCCTG GGCAGTGCTG CTGACGATAC TCGCGCTGCT AGGCCTGGTC
GTATCCGTTA CTTGGTTGTT CGGATCGCAG ATTGCGAACC AATTCAATAT ACTGGCGAAG
GATCTCCCTC AGAGCCTGAC CCAGGTCGTC CAGGAATTCG TGGAAACTCC CTGGGGGGTA
TGGGTAGTCG GTCGCGCGCA AGACGTGAAC ATTGGTAGCG CGACCGGGCC GCTGGCACGC
TATATCGCCG CATTCTTTGG CTCTGTTTTC CATACCTCCG CCTATGTTGC GGTTTTGCTA
TTTGCCTCGG GGTATTTCGC GGTACAGCCG GCACGATATG TCGACGGCCT GCTGCGGATG
GTTCCTGCGG ACCGCCGTCC GCGAGCGGAA GAGGTGATTG AGCTTCTCGG GTCAACGCTG
AGGCGCTGGC TCATTGGTCA GTCGATTACG ATGGCGGTGG TGGGTACACT GACAGCAATC
GGATTGTTGC TGCTTGGAGT TGCTGCGCCG ATCGCACTCG GCCTAATTTC GGCGATCTTT
GCTTTCGTTC CCTACGTCGG TCCGGTTCTC GCATCGCTAC TGGGGATCCT GATGGCTGCA
ATGCAAGGGC CAACGATCGC GCTCTATGTC ATTGCGCTTT ACGCGGCAAT CCATTTTGTC
GAAGGCAATC TCGTTACCCC ATTGGTGCAA GCGGAAGCCG TCGAACTGCC GCCAGTCCTG
ACGCTGTTTG CCACGCTCAT ATTTGGCTTG CTGCTTGGTC CAATCGGAGT CCTGCTGGCG
GCGCCCCTCG CGGTGGTTGT GCTCCTGGCT GTCAATACCC TCTATATCGA GGGGATGCTG
GGCGAGACTC GTGTCTGGCC CTCTAAGTCT TGA
 
Protein sequence
MLDVFLAMSA CQDPMEDAKG SRGSLEQVST RSFTRRLLIV CLVGAMMLAV WKLADLVVLA 
FGAALLALLL RGVVHEVSRN TRLPEPWAVL LTILALLGLV VSVTWLFGSQ IANQFNILAK
DLPQSLTQVV QEFVETPWGV WVVGRAQDVN IGSATGPLAR YIAAFFGSVF HTSAYVAVLL
FASGYFAVQP ARYVDGLLRM VPADRRPRAE EVIELLGSTL RRWLIGQSIT MAVVGTLTAI
GLLLLGVAAP IALGLISAIF AFVPYVGPVL ASLLGILMAA MQGPTIALYV IALYAAIHFV
EGNLVTPLVQ AEAVELPPVL TLFATLIFGL LLGPIGVLLA APLAVVVLLA VNTLYIEGML
GETRVWPSKS