Gene BBta_3435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3435 
Symbol 
ID5149925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3582028 
End bp3582864 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content61% 
IMG OID640558288 
Productputative UspA stress protein 
Protein accessionYP_001239435 
Protein GI148254850 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.34254 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.52884 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCATCA AGGACATTTT GCTAACCCTC ATCAGCTATC CGGATCCGAC GCTGGTTTCA 
GTAATTGATC GCGCGGTGTC GCTGGCCTCA ACGCTCGGCG CTCACATCGC GGCGATCTCA
TGTGAAACTC ATGTACAGGT CCCCGGCACC TTCTTGGGGC GCGCCGGCAA TCTAGGGTCC
ATCGTGGCCA GCGAGGCGCA CAGAAGCAGA AAGAATGCCC AGGACCTGCT GGCTGCGTTT
GAGGCGGCCG CCCAGAAGTC GGGCGTGCTG CATGAGGTCA TACTCGAGCG CTGCCTGACG
TCCGAAGTTC CGGGCCTGCT GGTGGAATAT GCGCGGCTGC GCGACCTGAC CATTGTGCCG
GTGCCACAAT CCTACGACCA ATGGTATGCT GAAGCCGTCA TCTGCGGGTC GGGACGACCG
ACTTTGGCGG TCCCGGAAGC CCCGTTGCCT AGAGAGGGCG ACCTGAACAG GGTGCTCGTC
GCATGGGATT TCAGCCGCGG CGCTGCACGC GCGGTCTCCG ATGCCGTTCC GATCCTGGAG
AAGGCGCGTG AAGTGTGTAT CCTCACGATC ACCAAAGAAA AGGCGATTTC AAGCCGACGC
TCACCTTCCG AACTCGCCAA GAACCTGTCA CGGCACGGGA TCAATGTGAT CGTCGACGAG
GTGGATGCGG CCGGACGGGG AATCGGCGAC GTACTCGCCG CGCAGATCGA GTCACGTAGA
CCGGACATCC TGGTCATGGG CGCCTATGGC CATTCGCGTT TCCGCGAGTT CATCTTGGGA
GGCGCAACCC GGAGCATTCT GACAAAGCCG CCGATTCCCG TTCTGTTTTC CCACTGA
 
Protein sequence
MAIKDILLTL ISYPDPTLVS VIDRAVSLAS TLGAHIAAIS CETHVQVPGT FLGRAGNLGS 
IVASEAHRSR KNAQDLLAAF EAAAQKSGVL HEVILERCLT SEVPGLLVEY ARLRDLTIVP
VPQSYDQWYA EAVICGSGRP TLAVPEAPLP REGDLNRVLV AWDFSRGAAR AVSDAVPILE
KAREVCILTI TKEKAISSRR SPSELAKNLS RHGINVIVDE VDAAGRGIGD VLAAQIESRR
PDILVMGAYG HSRFREFILG GATRSILTKP PIPVLFSH