| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3372 |
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| Symbol | |
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| ID | 5154988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 3528441 |
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| End bp | 3529388 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640558230 |
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| Product | putative conjugal transfer protein trbG |
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| Protein accession | YP_001239377 |
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| Protein GI | 148254792 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
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| TIGRFAM ID | [TIGR02775] P-type conjugative transfer protein TrbG |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.207123 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.974636 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGGCC GCATCCTCAC CGCGACGGCG CTTTCGTTTC TGCTGAGCGG CTGCGCCACG
TCGAAGCCGC CGGAGATCCG TTATGACGCC GAGGTGCCAC CGTTACCGGC AGCGCCTGTC
ACGGTTGATG ACAGGCCGCG GGCGCTCCAT GTGCCGCCGC CATGGAAGGT GACCTTCGGT
GGTAAGGCTG GCACGAAGGA GGAGGGCGAT CCTGTCGATC GGATCGAAAT GGCCAACGAT
GCGGCACGCG TCGAACCGCG CAAGCAGGGT TATTACAACG CGGCGCAGAT CTATGCTTAT
AGTCCAGGAG CGATCTATCA GGTCTACGCA GCACCGGGGC AAATTACCGA TATCGCGCTC
GAGCCAGGTG AACAGCTCAC GGGATCAGGC CCGGTCGCGG CCGGCGACAC CGTGCGGTGG
GTGGTCGGCG ATACCGAGAG CGGCGCGGGC GATACGCGTC GCGTCCACAT CCTGGTCAAG
CCGACGCGCG CAGGCATCGA GACCAATCTC GTCGTCAACA CCGACCGCCG CACCTATCTG
ATTGAGCTGC GCGCCCGCGA GAAGCCATAC ATGCCGGCCG TGGCCTGGTA CTATCCGGAA
GCGAATGCTG CGGGCAGGGC AATCGTAGCC CTGACGCCCG TCCTGCCAGA TCCCGCGCAG
CGCCGCTTCC GCTATCGCAT CGAGGGCGAT GATCCGCCAT GGCGACCGGT GATCGTCTAT
GACGACGGCC GCAAGGTCTA TGTTGAATTC TCTCCCGGCA TCGTCCAAGG CGAGATGCCG
CCATTGTTCG TGACCGGATC CGACGGCAAG CCGGAGATCG TCAACTATCG AGCTCATGGC
AACGTCTTGA TCGTGGATCG GCTGTTCGCG GCAGCCGAGC TGCGCCTGGG CGGCGACCCG
CAGCAGACCG TGCGGATCGT TCGCACCGAC GGACAGGTTC GGCCATGA
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| Protein sequence | MNGRILTATA LSFLLSGCAT SKPPEIRYDA EVPPLPAAPV TVDDRPRALH VPPPWKVTFG
GKAGTKEEGD PVDRIEMAND AARVEPRKQG YYNAAQIYAY SPGAIYQVYA APGQITDIAL
EPGEQLTGSG PVAAGDTVRW VVGDTESGAG DTRRVHILVK PTRAGIETNL VVNTDRRTYL
IELRAREKPY MPAVAWYYPE ANAAGRAIVA LTPVLPDPAQ RRFRYRIEGD DPPWRPVIVY
DDGRKVYVEF SPGIVQGEMP PLFVTGSDGK PEIVNYRAHG NVLIVDRLFA AAELRLGGDP
QQTVRIVRTD GQVRP
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