Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_2715 |
Symbol | rbsA |
ID | 5153435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 2809989 |
End bp | 2810774 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640557607 |
Product | sugar (ribose) ABC transporter ATP-binding protein |
Protein accession | YP_001238761 |
Protein GI | 148254176 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0375081 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGGTGA ATGAAGGGGG CGGAGCGGCG ATCAGCCCGG CCGCTCAGCC GGTCCTTGAG CTCAAGGGCG TCGGGAAGCA ATTCGGCGCG ATCCGCGCGC TGCAAGGCGT GGATCTTTCG ATCGGCGCCG GCGAGGTGGT CGGCCTGATG GGCGACAATG GCGCCGGCAA ATCGACCCTA GTGCGGATCA TCGCCGGCAA TTTCCCGCCG AGCCAGGGCT CGATCCATTT CTGCGGCCGC GAGGTGCATT TCCATCGGCC GATGGATTCG CGCAGCGTCG GCATCGAGGT CGTCTACCAG GACCTCGCGC TCGCCAACAA TCTGACCGCC GCTGCCAACG TCTTCCTCGG CCGTGAGCTG AAGCGCAATT TTGGCCCGCT GGTGCTGCTC GATCACAAGG GCATGGAGGC GCGCGCGCTG GAACTGTTCC GCGAGCTGCG CTCCGAGACG CGGCCGCATG ACCTCGTCAA GGACATGTCG GGGGGGCAGC GCCAGGCGGT CGCGATCGCG CGCACCCGGC TCTCCAACGC CAAGCTCGTG ATGATGGATG AGCCGACCGC CGCGATCTCG GTGCGCCAGG TCGAGCAGGT GCTGAGCCTG ATCCACCGGC TGAAGGAGCA GGGGATCGCC GTGATCCTGA TCTCGCACCG CATGCCCGAC ATCTTTGCGG TGTGCGATCG CGTCGTGGTG ATGCGGCGCG GCGAGAAGAA GGCCGACAAG CCGGTCGGCG ACACCAGCCC GGACGAAGTC ACCGCCCTGA TCACCGGCGC CAAGGAGACT GCGTGA
|
Protein sequence | MSVNEGGGAA ISPAAQPVLE LKGVGKQFGA IRALQGVDLS IGAGEVVGLM GDNGAGKSTL VRIIAGNFPP SQGSIHFCGR EVHFHRPMDS RSVGIEVVYQ DLALANNLTA AANVFLGREL KRNFGPLVLL DHKGMEARAL ELFRELRSET RPHDLVKDMS GGQRQAVAIA RTRLSNAKLV MMDEPTAAIS VRQVEQVLSL IHRLKEQGIA VILISHRMPD IFAVCDRVVV MRRGEKKADK PVGDTSPDEV TALITGAKET A
|
| |