| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2594 |
|---|
| Symbol | |
|---|
| ID | 5154502 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 2688063 |
|---|
| End bp | 2688824 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640557498 |
|---|
| Product | DeoR family transcriptional regulator |
|---|
| Protein accession | YP_001238652 |
|---|
| Protein GI | 148254067 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.330366 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTTCA CCGAGAGCCG GCTCGAATTG ATCAGAGCCA TGCTGCGGCA GAAGCAGCGC
GTTCACGTCA AGGACCTGGT CGATCAGCTC AAGGTCAGCC ACGAGTCGAT CCGCCGCGAT
CTGCGCGAGC TCGAAACGCA AGGCTTCGCC CGGCGTGTCT ATGGCGGCGC TGTGCTCGAG
AGCCAGGAAA GCGATCAGCC TTTTGCGGAA CGTCTGCGCG TCGGCGGCCG CGAGAAGATG
CGGATCGGAG AAGCGGCTGG CGCGCTGGTC AAGGACGGCA TGAAGATCTT CGTCGACGAG
GGAACGACGG CGCTGGCCTG CCTGAAATAC ATCGAGACAC GCAAGGATCT CACCATCGTC
ACCAACTCGC TCGCGGTCGC ATCGCATTTC TTTTACCAGG GATCGGCGAA CGTGCGCGTC
CTGGGCGGCC GGCTCCAGCC GGTCTACCAG GCGACGTTCG GTCCTGAGGC CGTCGCCGCC
ATCAAGGAAC ACTTTTTCGA TCTCGCGATC ATTGCGATCA GTGCCGTTCA CGCCCAGCGC
GGTTTCATGG ATTACGGCGA GGACGAAGCC ATCATGCGAC GCGCCGCCCG TGCTCAGGCC
AAGCGGTCTG TGATCGTCGC CGACAGCTCC AAGTTCGGCC GGCTCGGCTC GATCCACACG
TTCGGACTGG GTGACCTCGA TGCCGTCATC ACCGCTGCGC CTCTCGCCGC CGAGTTTGCC
GACCAGTTCC GTCAATTGAA AGTGGACGTG ATTTATGCCT GA
|
|---|
| Protein sequence | MSFTESRLEL IRAMLRQKQR VHVKDLVDQL KVSHESIRRD LRELETQGFA RRVYGGAVLE
SQESDQPFAE RLRVGGREKM RIGEAAGALV KDGMKIFVDE GTTALACLKY IETRKDLTIV
TNSLAVASHF FYQGSANVRV LGGRLQPVYQ ATFGPEAVAA IKEHFFDLAI IAISAVHAQR
GFMDYGEDEA IMRRAARAQA KRSVIVADSS KFGRLGSIHT FGLGDLDAVI TAAPLAAEFA
DQFRQLKVDV IYA
|
|---|
| |