| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2194 |
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| Symbol | |
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| ID | 5152357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 2268669 |
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| End bp | 2270579 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640557126 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_001238282 |
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| Protein GI | 148253697 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGTTG TTGCGACCAG AGTTGATCCC AGCCGCTTGC CGATGTGGGC TGCTGGCATC
CTTGCGTTTG TGTGCGGGGC GATCCTCGCA TTCAGCGGCT GGAGCGAATG GGAGTGGCGC
AACAACGAAC TGCGTAACGC GGAAGTCGAG CTCGGCAATC TGACCCGGTC GCTGACGCAG
CATGTGGAGG ACACGTTCGA GCTGGCGGAT TCGCTGATCA GGGGCGTGGT CACCGCTCTG
GAGAGAGATG ACGGCAAGCC TGGCGGTATC GAACGGCTTC AGGCGTTCCT GACGGCGAGA
AAAGCCAATC TCGGACGGGT CAGGGGAATC TTCGCCTACG ACCAGAGCGG AGCGTGGCTT
GCGACAACCG AGGACGTCAA TCTCTCCAAC TACAACAATG CCGATCGCGA CTATTTTGCC
CGTCACAGGA TCTCGGCGGA CCGCTCGCTT CTGATCGGCC GCCCTGTCCG GAGCAAGTCA
GGAGGGCAAT GGGTCATTAC TTTGTCGCGG CGCTGGAATC ATGCTGACGG TCGTTTCGGC
GGTGTCGTAG CGGCGACGAT CGATGTCGCT TACTTCGCTC AGTTCTATCG CCAGTTCGAT
GTCGGGCACC GCGGCACCAT CAGTCTGATG GCACGTGATG GCACCCTTCT CGCGGATAAT
TCGATCCCCA ATCCGCAGGA GCTTGGACGT CCCATGCTGG AAACCATTCC CTATCACCCG
CTCTCGGGTG TCTTGCGCTT TCGCCTGGCG GACGACGATC TCGATCGCAT CGGGACCTAT
CAGCATGCCC AACGTTACCC GTTCCTGGTG CTTGCAACAC GGACGCAGGC CGACGTGCTT
GCGGTGTGGA GACGCGATGC GCTGATCCGG GTCGGGGTGC TGGTCTGTCT TGTTGCCCTT
GTCGTCGCGA TCGGCGCTTT CCTCGTCAAG CAGTTGCTGC AGCGGCAGCG TCTGGCCTCA
GCCTTGGCCG CCAAGGAGGA GAACTTCCGG CTGCTTGCCG AGGGCTCCAG CGACATCGTG
ACTCGGATCG AGTTGGACGA ATGCATCGGC TATGTGTCGC CCTCCACGAT GCGCGTTCTT
GGCTGGCATC CCTCGCAACT GCTCGGAAAG CGCGCGATCT CCGGCGTGAA TCCGCTGGAT
CGTCCGCAGC TGCAGGAAAT GCTCGATCAG ATCAAGAAGG GCATCGTCGA CGAGGCGCGC
GCGACCTATC GCATGCGGCG CCGGGACAAG TCCGAGATCT GGGTCGAAGC CACGATCCGC
GCCACCCGCC GGCCGGATGG GACGCTCGAC GGCTTCGTTG CGGTTACCCG CGACGTGACG
CAGCAGAAGG CCTTGCAGGG CCGGCTCGAG ACGCTTGCGA TCGAGGATGG CCTGACCGGC
CTCGCCAATC GCCGCCGCTT CGACGAGCGG CTGCTGGAGG AGTGGGGCAG GGCGTATCGC
GACAAGACCT CGCTCGCATT GCTGATGATC GACATCGACC ATTTCAAGGC CTTCAACGAC
AGCTACGGCC ATCCGGCGGG CGACGAGTGC CTGCACACCG TTGCCGGAAT CCTTGCCGAC
GAGGCGCAGC GCAGCTCGGA TCTCGCGGCC CGCTATGGCG GTGAGGAGTT CGCGATTCTG
CTGCCGAACA CCGATGCTGC GGGATGCGCC AGGCTCGGTG AGCGCATCAG GCGGGCCCTG
CACGAGGCCC GCATCACGCA CGACCACAAT GGGCCGGGTA TCGTGACGGC GAGCATCGGC
GGCGCGGTGT GCCGTCCCGG CTTCGAACGC TCGGCCGGTC CTGCGTCGCT GATCGAGGCG
GCGGACCGCG CCCTCTACGC CGCCAAGGAT GGTGGCCGCG ACCGCGTGGT CATGGCCGGG
GAGATCATCG AGCTGCCGTC CGGCAAGACG CCGGCGACGG TTCCGGCGTG A
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| Protein sequence | MDVVATRVDP SRLPMWAAGI LAFVCGAILA FSGWSEWEWR NNELRNAEVE LGNLTRSLTQ
HVEDTFELAD SLIRGVVTAL ERDDGKPGGI ERLQAFLTAR KANLGRVRGI FAYDQSGAWL
ATTEDVNLSN YNNADRDYFA RHRISADRSL LIGRPVRSKS GGQWVITLSR RWNHADGRFG
GVVAATIDVA YFAQFYRQFD VGHRGTISLM ARDGTLLADN SIPNPQELGR PMLETIPYHP
LSGVLRFRLA DDDLDRIGTY QHAQRYPFLV LATRTQADVL AVWRRDALIR VGVLVCLVAL
VVAIGAFLVK QLLQRQRLAS ALAAKEENFR LLAEGSSDIV TRIELDECIG YVSPSTMRVL
GWHPSQLLGK RAISGVNPLD RPQLQEMLDQ IKKGIVDEAR ATYRMRRRDK SEIWVEATIR
ATRRPDGTLD GFVAVTRDVT QQKALQGRLE TLAIEDGLTG LANRRRFDER LLEEWGRAYR
DKTSLALLMI DIDHFKAFND SYGHPAGDEC LHTVAGILAD EAQRSSDLAA RYGGEEFAIL
LPNTDAAGCA RLGERIRRAL HEARITHDHN GPGIVTASIG GAVCRPGFER SAGPASLIEA
ADRALYAAKD GGRDRVVMAG EIIELPSGKT PATVPA
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