Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_1104 |
Symbol | |
ID | 5152655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 1175392 |
End bp | 1176198 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640556093 |
Product | hypothetical protein |
Protein accession | YP_001237260 |
Protein GI | 148252675 |
COG category | [S] Function unknown |
COG ID | [COG3904] Predicted periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.720924 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.156334 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGGTCCG CTCTGCATCG GCACCTCCAT GCATGGCTCG CCGGCAATCC CGACGAAAGC ATCCTGCGCT GGATCTTTCG CGCTGTCCTC GTCGTCAGCA TTGCCGTGCT TGCGGCCGAT CTCGTCGAGA TCAATCACAC CGGGCTCGGC TCCGACGCAG CATCGCCTCA GCTCGACATC CAGCCCGAAC AGCCGGAGAC GCCCTCGGTG CTGGCGCCGC TGTTGAAGCG GCTGATGGCG CTGCCGACCG GCGATCCCGC GCTGGAGCAG CCGCTCAGCC TCGAGCTGCG CGGCGGCGGA CGGCTCTATG CGACGGGCAC GATCACGCCC GGCAGCGCAC GCGCCTTCAC GGAGGAGGTC GAACGGCACG GCGAATATAT CAGGACCGTC GTGCTGAACT CGCCGGGCGG CTCGGTCGCG GATGCGCTTG CGATGGGCCG GCTCATCCGC ACACGCAAAT TCGCGACGGA GATCGAGGCC GGCAAATATT GCGCCTCATC CTGTCCGCTC GTTTTCGCCG GCGGCATCGA GCGACGCGCC GGCGAGCGCG CCGTGATCGG CGTGCACCAG ATTGCCGCCG TCCGAACCGC CAGCGCGGCG CGATCCGGCG ACGACATGAG CCGGGCGCAG AACATCTCGG CACGCTGCCA GCGCCACCTG GCCGATATGG GCATCGATCT GAAGGTCTGG GTGCATGCGA TGGAAACGCC GCATGACCAG CTGTTCACGT TCAAGCCCGA CGAGCTCAAA TCGCTCAATC TGGTCACATC CGCGCCAGAA TCGCGTCCCG AAAAACCACG CACTTAG
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Protein sequence | MGSALHRHLH AWLAGNPDES ILRWIFRAVL VVSIAVLAAD LVEINHTGLG SDAASPQLDI QPEQPETPSV LAPLLKRLMA LPTGDPALEQ PLSLELRGGG RLYATGTITP GSARAFTEEV ERHGEYIRTV VLNSPGGSVA DALAMGRLIR TRKFATEIEA GKYCASSCPL VFAGGIERRA GERAVIGVHQ IAAVRTASAA RSGDDMSRAQ NISARCQRHL ADMGIDLKVW VHAMETPHDQ LFTFKPDELK SLNLVTSAPE SRPEKPRT
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