| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0884 |
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| Symbol | rbtD |
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| ID | 5155239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 919876 |
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| End bp | 920604 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640555881 |
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| Product | ribitol 2-dehydrogenase (RDH) |
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| Protein accession | YP_001237051 |
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| Protein GI | 148252466 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.332992 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCAGGG AACTCGAAGG CAAGGTGGCC GCCGTCACCG GGGCCGCATC AGGCATCGGC
CTCGCCAGCA GCGAGGCGAT GCTGGCCGCC GGTGCCCGCG TCGTGATGAT CGACCGCGAT
GCGTCGGCGC TGGCTCGCCT GCGGGAGCGG CATGGCGAAG CCGTGATCCC CGTGGTGATC
GACCTGCTCG ATTCCACCGA TTGCGCCACG CTGCTGCCGC GCATCCTCGA TGCCGCCGGC
CGGCTCGACA TCCTGCATGC CAATGCCGGC AGCTACATTG GCGGCGATCT GGTCGATGCC
AGGACGGATG CGATCGACCG CATGCTGAAC CTCAACGTCA ATGTCGTCAT GAAAAACGTG
CGTGACGCGC TGCCGCACAT GATCGACCGC GGCTCCGGCG ACATCATCGT CACCAGCTCG
CTGGCGGCGC ATTACCCGAC GCCGTGGGAG CCGGTCTATG CCTCCTCGAA ATGGGCGATC
GACTGCTTCG TGCAGACCGT GCGCCGCCAG GTCTTCAAGC ACGGCATCCG CGTCGGCGCG
ATCTCGCCCG GCCCGGTGGT GACCGCATTG ATCGCCGATT GGCCGGCCGA GAAGCTCAAG
GAGGCGCGGG AGTCCGGCAG CCTGCTGGAG CCCGCCGAAG TCGCCAACGT CATCATGTTC
ATGCTGACCC GTCCGCGCGG CATGACCATC CGCGACGTCG TGATGCTGCC GACCAATTTC
GACCTGTAG
|
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| Protein sequence | MTRELEGKVA AVTGAASGIG LASSEAMLAA GARVVMIDRD ASALARLRER HGEAVIPVVI
DLLDSTDCAT LLPRILDAAG RLDILHANAG SYIGGDLVDA RTDAIDRMLN LNVNVVMKNV
RDALPHMIDR GSGDIIVTSS LAAHYPTPWE PVYASSKWAI DCFVQTVRRQ VFKHGIRVGA
ISPGPVVTAL IADWPAEKLK EARESGSLLE PAEVANVIMF MLTRPRGMTI RDVVMLPTNF
DL
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